| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3661 |
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| Symbol | |
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| ID | 5110122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4045808 |
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| End bp | 4047490 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640504916 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001189141 |
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| Protein GI | 146308676 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAGA CTCGACTTAT CCCTCCCGCC AACAACGCCC ACGCCTATCC GCTGCTGATC
AAGCGTCTGC TGCTGTCCGG TAGTCGTTAC GAGAAGACCC GTGAAATCGT TTATCGCGAC
AAGCTGCGTT ACAGCTACGC CACCTTCACC GAGCGTGTCG CGCGCCTGGC CAACGTGCTT
AGCCAGGCGG GGGTCAAGGC CGGTGATACC GTGGCTGTCA TGGACTGGGA CAGTCACCGC
TATCTGGAGT GCATGTTCGC CATTCCCATG CTCGGCGCGG TGCTGCACAC CATCAACATC
CGCCTGTCGC CGGATCAGAT TCTCTACACC ATGAACCATG CCGAAGACCG TTTCGTGCTG
GTCAACAGTG AGTTCGTGCC GCTGTACAAC GGTATTGCCG GTCAACTGAC CACGGTGGAG
AAAACCCTGC TGCTGACCGA TGGCGAAGAC AAGAACGCCG ACCTGCCGAA CCTCGTTGGC
GAGTACGAGA GCCTGCTGGC TGCGGCCAGC CCGCACTATG ACTTCGCCGA TTTCGATGAG
AACTCGGTGG CTACGACCTT CTATACCACT GGCACCACTG GTAACCCCAA GGGCGTGTAC
TTCACTCATC GGCAACTGGT GCTGCACACC ATGTCCATGG CGACCACCAT GGGCGGCCTG
GACAGCATCC GCCTGATGGG CAACGACGAT GTCTACATGC CGATCACCCC GATGTTCCAC
GTGCATGCCT GGGGCGTGCC GTACGTGGCC ACCATGCTCG GGGTCAAGCA GGTATATCCC
GGCCGCTACG AGCCGGACAT GCTTTGCCGC CTGATCAAGG AAGAAAAGGT CACCTTCTCC
CACTGCGTGC CGACCATTCT GCAGATGCTG CTGAGCGCGC CAGGTGCGCA GGGCCATGAT
TTCGGCGGCA TGAAGATGAT CATCGGTGGT AGCGCGCTCA ATCGCTCGCT GTATGAAGCG
GCGAAAGAAC GGGGTATTCA ATTGACAGCG GCTTATGGCA TGTCCGAGAC CTGCCCACTG
ATTTCCTGCG CTTACCTCAA TGAGGAGCTG CGCGCCGGTA GCGAGGACGA GCGCACCACC
TATCGAATCA AGGCCGGTAT TCCGGTGCCG CTGGTGGAAG CCGCAATCAT GGATGCCGAT
GGCAAATTGC TGCCTAGCGA TGGTGAGTCC CAGGGCGAGC TGGTGCTGCG CGCGCCCTGG
CTGACCCAAG GCTATTTCCG TGAGCCTGAG AAGGGCGAGG AACTTTGGGC CCACGGTTGG
CTGCACACCG GCGATGTGGC GACCATCGAT GGCATGGGGT TCATCGAAAT CCGTGACCGC
ATCAAGGACG TGATCAAGAC CGGTGGCGAG TGGATTTCCT CGCTGGAACT GGAGGACCTG
ATCAGTCGTC ACTCGGCGGT GCGTGAGGTG GCGGTGGTGG GCGTGCCCGA TCCGCAGTGG
GGTGAACGGC CATTCGCCTT GGTGGTGTTG CGTGACGCGC AGGGTTTGGA TGCCAAGGGG
CTAAAGGAGC ACCTCAAGCC TTTCGTCGAG CAAGGCCACA TCAACAAGTG GGCGATTCCC
ACGCAGATCG CGCTTGTTAC CGAAATTCCC AAGACCAGCG TCGGCAAACT GGACAAGAAG
CGCATTCGCG TCGAAATCGC CCAGTGGCAG GAGGCGGGTA GCACGTTCCT GTCCACGCTG
TGA
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| Protein sequence | MLQTRLIPPA NNAHAYPLLI KRLLLSGSRY EKTREIVYRD KLRYSYATFT ERVARLANVL
SQAGVKAGDT VAVMDWDSHR YLECMFAIPM LGAVLHTINI RLSPDQILYT MNHAEDRFVL
VNSEFVPLYN GIAGQLTTVE KTLLLTDGED KNADLPNLVG EYESLLAAAS PHYDFADFDE
NSVATTFYTT GTTGNPKGVY FTHRQLVLHT MSMATTMGGL DSIRLMGNDD VYMPITPMFH
VHAWGVPYVA TMLGVKQVYP GRYEPDMLCR LIKEEKVTFS HCVPTILQML LSAPGAQGHD
FGGMKMIIGG SALNRSLYEA AKERGIQLTA AYGMSETCPL ISCAYLNEEL RAGSEDERTT
YRIKAGIPVP LVEAAIMDAD GKLLPSDGES QGELVLRAPW LTQGYFREPE KGEELWAHGW
LHTGDVATID GMGFIEIRDR IKDVIKTGGE WISSLELEDL ISRHSAVREV AVVGVPDPQW
GERPFALVVL RDAQGLDAKG LKEHLKPFVE QGHINKWAIP TQIALVTEIP KTSVGKLDKK
RIRVEIAQWQ EAGSTFLSTL
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