Gene Pmen_3603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3603 
Symbol 
ID5106150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3975051 
End bp3975401 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content62% 
IMG OID640504856 
Producttransport-associated 
Protein accessionYP_001189083 
Protein GI146308618 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.335448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC CAATCAACCG TTTTGCTGCT GCCACTCTGA CCGCCGCCGT ACTGAGCCTG 
CCGCTCGCCT CGGCCGCGCT TGCCCAGCCG ACCATGCTCG CAGCCAACGA CACTATGGAC
AGTGCCGGGC AAGCGGTCTC CGATACCTGG ATCACCAGCA AGGTGAAGTC GACCTTCATC
GCTGACCAGA ATCTGAGCGG GCTGGACATC AAGGTCGAGA CCAACCAGGG CGTGGTGTCC
CTGTCCGGTA CGGTTGCCAC CGATGCCGAG CGCGACCTGG CCATCGCCAA GGCCAAGGAA
ATCGAAGGCG TGCGTGACGT TTCCGCCGAT GCCCTGAAAG CGGCTGACTA A
 
Protein sequence
MKQPINRFAA ATLTAAVLSL PLASAALAQP TMLAANDTMD SAGQAVSDTW ITSKVKSTFI 
ADQNLSGLDI KVETNQGVVS LSGTVATDAE RDLAIAKAKE IEGVRDVSAD ALKAAD