Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3603 |
Symbol | |
ID | 5106150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3975051 |
End bp | 3975401 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640504856 |
Product | transport-associated |
Protein accession | YP_001189083 |
Protein GI | 146308618 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.335448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGC CAATCAACCG TTTTGCTGCT GCCACTCTGA CCGCCGCCGT ACTGAGCCTG CCGCTCGCCT CGGCCGCGCT TGCCCAGCCG ACCATGCTCG CAGCCAACGA CACTATGGAC AGTGCCGGGC AAGCGGTCTC CGATACCTGG ATCACCAGCA AGGTGAAGTC GACCTTCATC GCTGACCAGA ATCTGAGCGG GCTGGACATC AAGGTCGAGA CCAACCAGGG CGTGGTGTCC CTGTCCGGTA CGGTTGCCAC CGATGCCGAG CGCGACCTGG CCATCGCCAA GGCCAAGGAA ATCGAAGGCG TGCGTGACGT TTCCGCCGAT GCCCTGAAAG CGGCTGACTA A
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Protein sequence | MKQPINRFAA ATLTAAVLSL PLASAALAQP TMLAANDTMD SAGQAVSDTW ITSKVKSTFI ADQNLSGLDI KVETNQGVVS LSGTVATDAE RDLAIAKAKE IEGVRDVSAD ALKAAD
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