| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3579 |
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| Symbol | |
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| ID | 5106126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3946353 |
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| End bp | 3947903 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640504832 |
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| Product | anaerobic nitric oxide reductase transcription regulator |
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| Protein accession | YP_001189059 |
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| Protein GI | 146308594 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.709796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTA ATCCTCTGCT GGAAACCCTG ATTCCCCTGG TGGCCGATCT GTCGCGCGAG
CTGGACGACG GCGAGCGTTA TCGTCGTCTG CTGGCGGCGC TGCGCCAGTT GTTCCCCTGC
GATGCCGTGG CGCTGCTGCG ACTCGACGGC GAGGTGCTGG TGCCGCTGGC AGTGGAGGGC
CTGAGCCCCG ACACCCTGGG GCGACGTTTC AGGGTCAGCG AGCATCCGCG CCTGGCCGCG
TTGCTGGAGC ATGCCGGGCC CACCCGTTTC GCCGCCGATT GCGGCCTGCC CGACCCTTAC
GATGGCCTGG TCGAGGGCCT GCACGGCCAT CTGGAAGTGC ACGACTGCCT CGGTTGCCCG
CTGTACCTGG ACGAACAGCT CTGGGGCCTG CTGACCCTGG ACTCGCTCGA CCCGGCCAGT
TTCGGCCGCT TCGAGCTGGA CAACCTGGAA GCCTTCGCCA GCCTGGCCGC GGCCACGGTC
AAGGTCAGCG AGCGCATCAG CGGTCTGGCG CAGCGGGTGG AGGCCGAGCG CCAGCTCACC
GAGCTGTACA AGCAGGCCCG TCAGCAGCCG CGCGAGCTGG TGGGGCAGAG CGCGGCGCTG
CGCAAGCTGC AGGAGGAAAT TCGCCTGGTC GGTGACAGCC CGCTGACGGT GCTGATCACC
GGTGAGACCG GCGTCGGCAA GGAGCTGGTG GCCGAGGCCA TCCATGCCGC CTCACCACGG
GCGCAGCGGC CGCTGGTCAG CATCAACTGC GCGGCCTTGC CCGATGCGCT GGTGGAGAGC
GAGCTGTTCG GCCATGTGCG TGGCGCCTTC TCCGGGGCGA TGAGCGAGCG CAGCGGCAAG
TTCGAGCTGG CCGATGGCGG CAGCCTGTTC CTCGACGAGG TGGGCGAACT GCCGCTGGCG
ATCCAGGCCA AGCTGCTGCG CGTGCTGCAG AGCGGCCAGT TGCAGCGGGT CGGTTCGGAT
CGCGAGCACC GTGTCGACGT GCGGGTGATC GCCGCCACCA ACCGCGACCT GGCGGCCGAG
GTGCGCGCCG GGCGTTTTCG CGCCGACTTC TATCACCGCC TGAGCGTCTA CCCGCTGCCG
GTGCCGCCAC TGCGCGAGCG CGGCCGCGAT GTGTTGCTGC TGGCCGGCTA TTTCCTCGAG
GAGAATCGCG CGCGCCTCGG GCTGCGCAGC CTGCGCCTGA GCACGGATGC GCAGAAGGCG
CTGCTGGGCC ACGACTGGCC GGGTAACGTG CGCGAACTGG AGCACCTGAT CGGCCGTGCG
GCGATCAAGG CGCTGGCGCG CCATGGCGAG CGCCCGCGCA TTCTCAGTCT GGAGGCGCAG
GATCTGGATC TGCCAACGGC CGAGGCGCTG CGTTCGGTCG ACGAGGGGCT GGCGCCCGCC
GAGCCGCTGC CGGCAGGGGT GGAGCTGCGC AGCGCCGTGG ACGCCTTTCA GCGCCGGCTG
ATCGAGCAGT GTCTGGCGCG CCACCAGGGT AAATGGGCTG ACGCGGCACG TGAGCTGGGC
ATCGATCGGG CCAATCTCAG CAGATTGGCG AAGCGCCTCG GTTTGCGTTG A
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| Protein sequence | MTANPLLETL IPLVADLSRE LDDGERYRRL LAALRQLFPC DAVALLRLDG EVLVPLAVEG
LSPDTLGRRF RVSEHPRLAA LLEHAGPTRF AADCGLPDPY DGLVEGLHGH LEVHDCLGCP
LYLDEQLWGL LTLDSLDPAS FGRFELDNLE AFASLAAATV KVSERISGLA QRVEAERQLT
ELYKQARQQP RELVGQSAAL RKLQEEIRLV GDSPLTVLIT GETGVGKELV AEAIHAASPR
AQRPLVSINC AALPDALVES ELFGHVRGAF SGAMSERSGK FELADGGSLF LDEVGELPLA
IQAKLLRVLQ SGQLQRVGSD REHRVDVRVI AATNRDLAAE VRAGRFRADF YHRLSVYPLP
VPPLRERGRD VLLLAGYFLE ENRARLGLRS LRLSTDAQKA LLGHDWPGNV RELEHLIGRA
AIKALARHGE RPRILSLEAQ DLDLPTAEAL RSVDEGLAPA EPLPAGVELR SAVDAFQRRL
IEQCLARHQG KWADAARELG IDRANLSRLA KRLGLR
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