| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3571 |
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| Symbol | |
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| ID | 5106118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3937730 |
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| End bp | 3938683 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640504824 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001189051 |
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| Protein GI | 146308586 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.368621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.292883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCG GCATCCCGAA TCCCCCGCAC GGTCGTTCCA TGAAACTGGA TATTCAGGAA
ATCGAAACCT TCCTGCGCGT CGCCGAACTC GGCAGCGTCA GCCTCGCCGC CCAGCAGCTG
GGGGTGGCCA AGTCGGTCGT CAGCAAGCGT CTCAGCGACC TGGAACGCAA CCTGGGCGCT
CGGCTGCTGT TTCGCTCCAC GCGCAAGGTG GCGCCGACCG ACAGCGGTCA GCGCTTCTAT
CACCAGGCCA AGGCCGCGCT GGCCGAACTG CAGAGCGCCG CCGAGGCGGT GGCCTTCGAG
GATGGCAGCC TGGCCGGCAG CCTGCGCATT CTTGCGCCGA TGAGCTTTGG CACCTTGTGG
CTGGCGCCGC GGCTGGCCGA GTTCATGCGC CAGCATCCGC AGCTGGAACT GGCCCTGCAG
CTGGACGACC GCGTCAGCGA CTTCGAGCGC GAAGGCTACG ACCTGTGCCT GCGCATCTCG
CGCCTGCACG ACAGCGTCCT GATCGCCCGG CGCCTCGGCA GCAGCCCGCG GGTGGTGTGC
TGCAGCCCGG ACTACATCCG CGAGCATGGC GCGCCCGGGC GCCTGGAGCA GCTGCTCGAA
CACCCCTGCA TCGGCTATTG CAACCTGAGC GCCGGGCAGT TGTGGTCGTT CGACGATCCG
GCCGACCCGC AGCGCCCACT GACCCTGGCG GCCGGCGGGC GCTTCACCAG CAACAACGGC
GAGGCCATGC GCGACGCGGC CCTGGCCGGC CTGGGCGTGG CGGTGCTGCC GCGCTTCATC
GTGCAGCGCG ACCTGCAGGC CGGCAGGCTG GTGCAGGTGC TGGCCGAGAT CAGGCCCACC
GACGATCAGA TCCACGCCCT GTATCCCCGT GCGCGGCGTG CCTCGCCCAA GGTCCAGGCG
CTGTGCGACT TCCTGCAGCA GGCGCTGGCG CTGGAGAGCT GGGCGGGGCC GTAG
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| Protein sequence | MLSGIPNPPH GRSMKLDIQE IETFLRVAEL GSVSLAAQQL GVAKSVVSKR LSDLERNLGA
RLLFRSTRKV APTDSGQRFY HQAKAALAEL QSAAEAVAFE DGSLAGSLRI LAPMSFGTLW
LAPRLAEFMR QHPQLELALQ LDDRVSDFER EGYDLCLRIS RLHDSVLIAR RLGSSPRVVC
CSPDYIREHG APGRLEQLLE HPCIGYCNLS AGQLWSFDDP ADPQRPLTLA AGGRFTSNNG
EAMRDAALAG LGVAVLPRFI VQRDLQAGRL VQVLAEIRPT DDQIHALYPR ARRASPKVQA
LCDFLQQALA LESWAGP
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