| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3566 |
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| Symbol | |
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| ID | 5106113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3933635 |
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| End bp | 3934594 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504819 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_001189046 |
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| Protein GI | 146308581 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.296808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.752967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCA CCCCGCCCTA TCTGATCCAT CAGGCCGAAG CCGCCCAGCT CCTCGCCCGC
ATCGATGTCG TGCAAGCCAT GCGCGGGATG TTCCGCAGCC TGGCGCGCGG CCAGGCGGTG
CAGCCGGCCC AGCAGCTGGT GGAATTTCCC GACGGCGGCG ACTTCATCAA CTACCTCGGC
GTGCTCGCCG AACAGCGCGT CTACGGGGTC AAGACCTCGC CCTACATCCC GGCTGAGCAT
GGCGCCATCG TCACCGCCTG GACCCTGCTG ATGTCGATGG ACAACGGCCA GCCACTGCTG
CTGTGCGATG CCGGCGAACT CACCACCGCC CGTACCGCGG CCACCACTGC CGTGGCGGTG
GACGCCCTGG CGCCGGCCAC GGCCAAACGC CTGACGGTGA TCGGCAGCGG CCCGGTGGCG
CGTGCCCATG TCCGTTATGC GCAGGGCCTG CGCGACTGGC AGAGCATCCG CCTGTACTCG
CCAAGCCTGG TGGGCAAGCA CGGCGTCGAA CTGCTGCAAC TGCAGCAGCT CGATCCGCGC
ATGCAGCTGT GCGCGAGCCA GGCCGACGCC TGCGCCGACG CCGATGTGGT GATGCTGTGT
ACGTCGTCGG CCAGCCCGGT GCTCGACCCC GGCGAACTGC ACAAGCCGGC GCTGATCACC
TCGATCAGCA CCAATGCGCC GCGCGCTCAT GAGGTGCCGC CGGCCAGCCT GGCGCAGATG
GATGTCTATT GCGACTACCG CGCCACCACC CCGGCCAGCG CCGGCGAGAT GCGCCTGGCC
AGCGAGCAGC ACCTGTGGGA CCGCGCGCTG ATTCGCGGCG ACCTGGCCGA GCTGCTCGAT
CAGTCGGCGC CCTTGCCCGA CTACCGTCGC CCGGTATTCT TCCGCTCCAT CGGCCTGGGC
CTGGAAGACG TCGCCCTGGC CCACGCACTC CATCAACTCA AGCGGGCCGC GGAGGGCTGA
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| Protein sequence | MPSTPPYLIH QAEAAQLLAR IDVVQAMRGM FRSLARGQAV QPAQQLVEFP DGGDFINYLG
VLAEQRVYGV KTSPYIPAEH GAIVTAWTLL MSMDNGQPLL LCDAGELTTA RTAATTAVAV
DALAPATAKR LTVIGSGPVA RAHVRYAQGL RDWQSIRLYS PSLVGKHGVE LLQLQQLDPR
MQLCASQADA CADADVVMLC TSSASPVLDP GELHKPALIT SISTNAPRAH EVPPASLAQM
DVYCDYRATT PASAGEMRLA SEQHLWDRAL IRGDLAELLD QSAPLPDYRR PVFFRSIGLG
LEDVALAHAL HQLKRAAEG
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