| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3562 |
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| Symbol | |
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| ID | 5106109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3927458 |
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| End bp | 3929359 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504815 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_001189042 |
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| Protein GI | 146308577 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.735849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.720898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAG CGCCCCTGAT TCGCACCCTG CAGGATATCG AGCAGATCGA GAAAACCCCG
CTCGCGGCGC GCGAGCTGCC CGCCAGCACC TACGAGCTGA TCCGTCGCAG CGCCGCCGCC
CAGCCGGACG CCCCGGCGCT GTCGTTCATC CTGCAGGGCA CGGGCGATGA AACGCCGCTG
CGCCTGAGCT ATGCCGAGCT GCTGGGCAAG ATCACCCAGA CCGCCAACGC CTTCCACCGC
CTCGGCCTGC GGCCGGGCAA GGCGGTGTCC TTCCTCCTGC CCAACCTGCC GCAGACCCAC
TTCACCATCT GGGGCGGCGA GGCGGCCGGC ATCGTCAACG CGATCAACCC GCTGCTCGAA
CCTGCGCATA TCGCTGAACT GATCCACGCC GCCGATTCCG AGCTGCTGGT GACCCTGGCG
CCCTTCCCCG GCACCGACCT GTGGGACAAG GTCAGCGCCA TGCGCGACCA TCTGCCGGAG
CTCAAGGCGA TTCTCTGCGT GGACCTGGCC AACCTGCTGC CGGAACCGCA GCGCAGTGCG
CTCAAGGCCC AGCGTGGCCC CCTGCCCGAC GGCGTGCTGG ATTTCGACGA GACCATCGCG
GCCTGCCCCG CCGACCATCT GGAAAGCGGC CGCAACATCC TGCCCGAGGA CATCGCCAGC
TACTTCCATA CCGGTGGCAC CACCGGCACG CCGAAACTGG CGCCGCACAG CCACGCCAAC
GAAGTGGCCA TGGCCTACAG CATGAATCTG GTGACCCGCT TCGCCCCGGG CGATGTCACC
CTCTGCGGCC TGCCGCTGTT TCACGTCAAC GGCGTGGTGG TCACCGGCCT GACCGCCTTC
ATCGGCGGCG CCGAGGTGCT GCTGGCCACC CCGCAGGGCT ATCGCAACAC CAGCCTGATC
GGCAACTTCT GGAAGGTGAT CGAACGCTAC AGGGTCAGCT TCTTCAGCGG GGTTCCCACC
ATCTATGCCG GCCTGCTGCA GGTTCCCAGC GAGGGGTATG ACCTGTCCTC GCTGAAGTAC
GCACTGTGCG GCGCCGCGCC GATGCCGGTG GAGCTGATCC GCCAGTTCGA GGCCAAGACC
GGGCTGACCC TGATCGAAGG CTACGGCCTG ACCGAAGGCA CCTGCGGCAG CTGCGCCAAC
CCGCCGGCCG GCGAGCGCCG CCCCGGCTCC ATCGGCCTGC GCATGCCCTA CTGCGACGTG
AGCATCAAGG TGCTCGACGA ACAGGGGCGC TACCTGCGAG ATGCCGCGCC GAACGAGATC
GGCAATCTGT GCATCCGCGG CGCCACGGTG TTCAAGGGCT ACCTGCAGGC CAGCAAGAAC
GCCGACATCT GGGTCGACGG CGACTGGTTC AATACCGGCG ACCTCGGCCG CAAGGACGAA
GACGGCTATA TCTGGCTGAC CGGGCGCAGC AAGGATCTGA TCATCCGCGG CGGCCACAAC
ATCGATCCGC AGATGATCGA GGAAGCGCTG CACAAGCACC CGGCCGTGGC CCTGGCGGCC
GCGGTCGGCA AACCCGACGA GAAGGCCGGC GAACTGCCGG TGGTGTACGT GCAGCTCAAA
CCCGGCGCAC AGGCCAGCGA GGCCGAGTTG CTCGAGCACG CCGCGGCGCA CATTCCCGAG
CGCGCCGCGG TGCCCAAGGA CGCCTGGATC ATCGACGCCA TCCCGGTCAC CGCGGTGGGC
AAGACCTTCA AACCGGCGCT GCGCTTCGAT GCCATTGCCC GCGTCTACCA GAGCGCCCTG
CGTGAGCTGC ACCCCGATAT TCGCGTCGAG GTGAGCAGCG ATGACCAGCT CGGCCAACTG
GCTCAGGTGT ACCTGCCGAG CCAGGACCAG ACGCTGATTG CAGCGGTCGG CCTACGCCTC
GCAGGCTACG CCGTGGCGCA TCGCATCAAC CCGCAAGCGT GA
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| Protein sequence | MTTAPLIRTL QDIEQIEKTP LAARELPAST YELIRRSAAA QPDAPALSFI LQGTGDETPL
RLSYAELLGK ITQTANAFHR LGLRPGKAVS FLLPNLPQTH FTIWGGEAAG IVNAINPLLE
PAHIAELIHA ADSELLVTLA PFPGTDLWDK VSAMRDHLPE LKAILCVDLA NLLPEPQRSA
LKAQRGPLPD GVLDFDETIA ACPADHLESG RNILPEDIAS YFHTGGTTGT PKLAPHSHAN
EVAMAYSMNL VTRFAPGDVT LCGLPLFHVN GVVVTGLTAF IGGAEVLLAT PQGYRNTSLI
GNFWKVIERY RVSFFSGVPT IYAGLLQVPS EGYDLSSLKY ALCGAAPMPV ELIRQFEAKT
GLTLIEGYGL TEGTCGSCAN PPAGERRPGS IGLRMPYCDV SIKVLDEQGR YLRDAAPNEI
GNLCIRGATV FKGYLQASKN ADIWVDGDWF NTGDLGRKDE DGYIWLTGRS KDLIIRGGHN
IDPQMIEEAL HKHPAVALAA AVGKPDEKAG ELPVVYVQLK PGAQASEAEL LEHAAAHIPE
RAAVPKDAWI IDAIPVTAVG KTFKPALRFD AIARVYQSAL RELHPDIRVE VSSDDQLGQL
AQVYLPSQDQ TLIAAVGLRL AGYAVAHRIN PQA
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