Gene Pmen_3555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3555 
Symbol 
ID5106102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3920279 
End bp3920749 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content67% 
IMG OID640504808 
Producthypothetical protein 
Protein accessionYP_001189035 
Protein GI146308570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.159937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATG CCAATGCCGA ATTGATCCAG CGTTTCTACC GCGCCTTCCA GAACCTCGAT 
GCCGAGACCA TGGCGGCCTG TTACGCCGAG GACGTGCATT TCTCCGACCC CGCCTTCACC
GACCTCAACG GCAGCGAGGC GGGCGACATG TGGCGCATGC TCTGCGCTCG TGCCGAGGGC
TTCTCGCTGA CCTTCGATCA GGTGCAGGCC GACGAGCGCG AGGGCAGTGC GCGCTGGGTC
GCCACGTACC GTTTCAGCGC CACCGGCCGC CAGGTGGTCA ACCACATCCA GGCGCACTTC
GTGTTTCGCG ATGGGCTGAT CGTCGAGCAC CGCGATCACT TCGATCTGTG GCGCTGGACG
CGCCAGGCAC TGGGGGCCAA GGGCCTGCTG CTGGGCTGGG CGCCGCCGGT ACAGGCTGCC
ATTCGTCGGC AGGCCGCCCG TGGCCTGGCC CAGTTTCGCG CGTCTCGCTG A
 
Protein sequence
MSHANAELIQ RFYRAFQNLD AETMAACYAE DVHFSDPAFT DLNGSEAGDM WRMLCARAEG 
FSLTFDQVQA DEREGSARWV ATYRFSATGR QVVNHIQAHF VFRDGLIVEH RDHFDLWRWT
RQALGAKGLL LGWAPPVQAA IRRQAARGLA QFRASR