| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3532 |
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| Symbol | |
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| ID | 5106000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3893193 |
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| End bp | 3894569 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640504785 |
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| Product | citrate transporter |
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| Protein accession | YP_001189012 |
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| Protein GI | 146308547 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.237268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGCGT TGATGGCACT CGTCTTTGTC CTCGGCTACC TGTGCATTGC ACTGGAGCAC
CCGTTGAAGA TCGACAAGGC GGCCTCAGCG CTGCTCACCG CCGTGGTGGC CTGGACTCTT
CTGGTCCTGG GTGCGGACAG CATCCTGCCG CTGCTCGGTA CGGGTACCGC CGGCGCCAGC
ACCAACAGCC ATCATGTGAT CGAGGAGCTG CGCCATCACC TGGGCGAGAT CTCCGAGATC
CTGTTCTTCC TCATGGGCGC CATGACCATC GTCGAGCTGA TCGACGCCCA CGAAGGCTTC
AAGGTGATCA CCGACCGCAT CCGCACCACC AAGCGCGTGC ACCTGCTGTG GCTGGTGGGC
CTGATCACCT TCTTCCTGTC CGCCGCGCTG GACAACCTGG CCACCACCAT CGTGATGATC
TCGCTGCTGC GCAAACTGAT CGCCGACAAG CACGAGCGCT GGTTCTACGC CGGTATCGTG
GTGATCGCCG CCAACTCCGG CGGCGCCTGG TCGCCCATCG GCGACGTGAC CACCACCATG
CTGTGGATCG GCAACCAGAT CACCGCCACC GGTATCGTCG TCAAGCTGAT CGTGCCCAGC
CTGATCTGCC TGCTGGTGCC GCTGATCATC ATGAGCTTCC GCCTCAAGGG CGAGGTCATC
CCGCCGCGCC TGAAGGAAAG CGCCGAAAGC CGCCGCGACC CGACCACCCC GTTCGAGCGC
AACCTGGTGT TCTGCTTGGG GCTAGGCGCG CTGATCTTCG TGCCGATCTT CAAGACCATC
ACCCATCTGC CGCCGTACAT GGGCATCCTC TTCGGCCTGA GCGTACTGTG GGTGACCACC
GAAATCATTC ACCGCAGCAA GAACAGCGAA GACAAGGACC CGCTGTCGGT GGTCGGCGTA
CTGCGCCGCA TCGACATCAC CAGCGTGCTG TTCTTCCTCG GCATCCTGCT GGCAGTGTCG
GCCCTGTCCA GCGCCGGCCA CCTGATCCAG GTCGCCACCT ACCTCAAGGA CGGCCTCGGC
AACGTCTACA GCATCGCCAT TTCCATCGGC CTGCTGTCGG CCGTGGTGGA CAACGTGCCG
ATGGTCGCCG GCGCCATGAA GATGTATCCG CTGGTCAGCC CGGAAGCCCT GGCGGCTGCC
GCGGCGGACG AGCTGCCATG GCTGAGCAAC TTCGTGGTCA ACGGCAACTT CTGGGAAATG
CTCGCCTACT GCGCCGGCAC CGGCGGCAGC TGCCTGATCA TCGGCTCGGC GGCCGGCGTG
GCGGCCATGG GCATGGAGAA GATCAACTTC ATCTGGTACC TGAAGAAGAT CACCGGCCTG
GCCTTCATCG GTTACCTGGC CGGTGCCGTC ACCTATATGC TGATGTTCGC CGCCTGA
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| Protein sequence | MYALMALVFV LGYLCIALEH PLKIDKAASA LLTAVVAWTL LVLGADSILP LLGTGTAGAS
TNSHHVIEEL RHHLGEISEI LFFLMGAMTI VELIDAHEGF KVITDRIRTT KRVHLLWLVG
LITFFLSAAL DNLATTIVMI SLLRKLIADK HERWFYAGIV VIAANSGGAW SPIGDVTTTM
LWIGNQITAT GIVVKLIVPS LICLLVPLII MSFRLKGEVI PPRLKESAES RRDPTTPFER
NLVFCLGLGA LIFVPIFKTI THLPPYMGIL FGLSVLWVTT EIIHRSKNSE DKDPLSVVGV
LRRIDITSVL FFLGILLAVS ALSSAGHLIQ VATYLKDGLG NVYSIAISIG LLSAVVDNVP
MVAGAMKMYP LVSPEALAAA AADELPWLSN FVVNGNFWEM LAYCAGTGGS CLIIGSAAGV
AAMGMEKINF IWYLKKITGL AFIGYLAGAV TYMLMFAA
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