| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3460 |
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| Symbol | |
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| ID | 5105930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3816415 |
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| End bp | 3818760 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504714 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001188942 |
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| Protein GI | 146308477 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG3665] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC CCGTGATTTC CCGGCCGCTG GAGCCGGCGC TGTTCGCCCG TACCCCAGGG
CTGGAACGCC ACCGCGTCGC CCCCGGCGGC TTGACCGTGG TGGCCCTGGA GCCGGGCGAC
CGCCTGGAGC TGATCGACCT CGAAGGCGAC CAGGCCGCCG AGCTGCTGGC CTTCGCCGAC
AATGGCCGAG CGGCGCTTAC CGCCCTCGGG CTCGCCGCCT GCCCGGGTGC CGAGTTCATC
ACTCACCTGC TGCACGACGG CAGCCGCGAG GCGGCCCAGG TCGGCGCCGC GCTGCTGCGC
CGCGGCATCG ATTGCCGCCA CCTGCCGCCT GCCGCGCGGC TCTGGCCACC CGGCACCCCA
GCCGGTTACC GCCGCACCCT CAGCGCCAGC GCAGCACTGC TGGTGATAGT CGCCGCACCC
GGCGGACAGA CGCCGGTGGA CCAGCAGACG CGCGCCAGCG AGCTGCGCCT GCTGATCCAA
CGCGCCAACC CGTCCAGCCT GCTGCTGCCG ACACTGCCGG CGCCGCTCGG CGAACTGGTT
GACGAGTTCA CCATCCACCC CGGCACGGCG CGCGATTACG TGGTCGCTGC CGGCCAGTAC
ATCCAGGTGA TCGACGTCGC CGGGCGGCAA TGCTCGGACT TCGTCGCCTT CGACCGGCGC
GGCCTCGACG CCGGCCGCGA GATCGACCTC GACCCCACCG TCACCCGCAC CCTGAACGGC
AATGCCTACC CGGGCCCCGG CCTGTTCAGC AAATTCTTCG ACCGCGACAT GCAGCCGATG
CTGGAGGTGG TGCGCGACAC CGTCGGCCGC CACGACACCT TTGCCCTGGC CTGCACCGCG
CGCTACTACG AAAGCCAGGG TTACTTCGGC CACGCCAACT GCAGCGACAA CATCAGCCGC
GCACTGGCCA AGCATGGCGT GCACGGCCGC CCCGGCTGGC CGGCGATCAA TTTCTTCTTC
AACACCGGCA TCGACGCCCA CCAGCAACTG ACCCTCGACG AGCCCTGGTC GCGCCCCGGC
GACTATGTAC TGCTGCGCGC CATGACCGAC CTGGTCTGCG CCAGCAGCTC CTGCCCGGAC
GACATCGACC CGGCCAATGG CTGGCAGCCC ACCGACATCC ACATCCGCGT GTATTCCGAA
CAGGAGCGTT TCAGTATCGC CATGGCCACT CGCAAGACAC CCGACGCCGA CCCGGTGCTG
ACCCGCGAGA GCGGCTTCCA CCCCGGCACC TCTGCCCTCA CCCGCCACTT CATCGACTAC
CGCGGCTGGT GGACCCCCAC CCAGTTCGAC GGCTACGGCA CGCTGGCGGA ATACCACGCC
TGCCGCGAAC GGGTCGCGGT GATGGACCTC TCCGCCCTGC GCAAATTCGA GGTGCTCGGC
CCCGACGCCG AAGCCCTGCT CAACTACTGC CTGACCCGCG ACGTGCGCAA GCTGGCGGTA
GGCCAGGTGG TCTACAGCGC CATGTGCTAC GAGCATGGCG GCATGCTCGA CGACGGCACG
CTGTTGCGCC TTGGCCCGGA CGCCTTCCGC TGGATCGGCG GCGAGGACTT CGGTGGCGAA
TGGCTGCGCC AGCAGGCCGA GAAACTGGAC ATGAAGGTGT GGATCAAATC CGCCTCCGAG
CAGATCCACA ACATCGCTGT GCAAGGCCCG CTCAGCCGCC AACTGCTGCA GCAGATGATC
TGGACGCCAG GTACCCAGCC GCCCCTGGCA GAGCTGGGCT GGTTCCGCTT CCTCACCGGC
CGCTTGGGCG ACTACAACGG CTGTCCGCTG ATGGTCTCGC GCACCGGCTA CACCGGCGAG
CTGGGCTTTG AAATCTGGTG CCACCCCAGC GATGCCATGC AGATCTGGCA ACGCCTCTGG
CAACTCGGCG AGCCACTGGG CCTGGCACCG CTCGGCCTGC ACGCCCTGGA CATGCTGCGC
ATCGAGGCAG GGCTGATCTT CGCCGGCTAC GAGTTCAGCG ACCAGACCGA CCCGTTCGAG
GCCGGCATCG GCTTCTGCGT GCCGCTGAAG AGCAAGCAGG ACGATTTTAT CGGCCGCCAG
GCGCTGCTGC GGCGCAAGGA ACACCCGATG CACAGGCTGG CCGGCCTCGA ACTGGAAGGC
AACGAGCCAG CGTCCCACGG CGACTGCGTA CACCTCGGCC GCGCCCAGGT CGGGGTGATC
ACCAGCGCCA CCCGCTCGCC AGCGCTGGGC AAGAACATCG CCCTATGCCG TCTCGACGCC
TCCTACTGCG AGCCCGGCAC CCGGCTGGAA GTGGGCAAGC TCGACGGCCA GCAGAAACGC
ATCGCGGCAA CGGTGAGCGC CGGCACTGTC GCCTACGACC CGGACAAGAA CCGTGTGCGG
GCGTAG
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| Protein sequence | MNLPVISRPL EPALFARTPG LERHRVAPGG LTVVALEPGD RLELIDLEGD QAAELLAFAD
NGRAALTALG LAACPGAEFI THLLHDGSRE AAQVGAALLR RGIDCRHLPP AARLWPPGTP
AGYRRTLSAS AALLVIVAAP GGQTPVDQQT RASELRLLIQ RANPSSLLLP TLPAPLGELV
DEFTIHPGTA RDYVVAAGQY IQVIDVAGRQ CSDFVAFDRR GLDAGREIDL DPTVTRTLNG
NAYPGPGLFS KFFDRDMQPM LEVVRDTVGR HDTFALACTA RYYESQGYFG HANCSDNISR
ALAKHGVHGR PGWPAINFFF NTGIDAHQQL TLDEPWSRPG DYVLLRAMTD LVCASSSCPD
DIDPANGWQP TDIHIRVYSE QERFSIAMAT RKTPDADPVL TRESGFHPGT SALTRHFIDY
RGWWTPTQFD GYGTLAEYHA CRERVAVMDL SALRKFEVLG PDAEALLNYC LTRDVRKLAV
GQVVYSAMCY EHGGMLDDGT LLRLGPDAFR WIGGEDFGGE WLRQQAEKLD MKVWIKSASE
QIHNIAVQGP LSRQLLQQMI WTPGTQPPLA ELGWFRFLTG RLGDYNGCPL MVSRTGYTGE
LGFEIWCHPS DAMQIWQRLW QLGEPLGLAP LGLHALDMLR IEAGLIFAGY EFSDQTDPFE
AGIGFCVPLK SKQDDFIGRQ ALLRRKEHPM HRLAGLELEG NEPASHGDCV HLGRAQVGVI
TSATRSPALG KNIALCRLDA SYCEPGTRLE VGKLDGQQKR IAATVSAGTV AYDPDKNRVR
A
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