| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3452 |
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| Symbol | |
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| ID | 5105922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3808639 |
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| End bp | 3809304 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504706 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001188934 |
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| Protein GI | 146308469 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.413638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.532331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCACG CCAGCCTGGT ATTGACCGCC GCGCCGCCGG TGCCGGCCTG GGAAGAGTTG
ACTGAGCGCG AAGGGCAGAC CCTGGCGCTG ATCGGCGCGG GCCTGAGCAA CAAGCAGATC
GCCCGTGAGC TGGGCATCAG CGACGGCACG GTGAAGATCT ACGTGCGCAG CCTGCTGCGC
AAATTCCGCC TCAGCTCCAG GCTGGAGCTG GCCACCCGGC TGCACCGCCG CGGCGCTTCC
TGGCGCATGA GCGACGAAGC GGCTTTGCCC CCCGAGGGTG CAGACGAGGG CGTGACTGCA
CCGATTGCGC CCGCCGCAGG CCTGCTCGAC GAACTGCCGG GGCTGATCTA CCGCGGTGAC
AACGACCGCA CCTGGTTTAT GGAATACGTC AGCGCCGGCT GCCTGCCCCT GACCGGCTAC
CCCGCCGAGT ACCTCACGCG CAGCCCTCAG CACAGCTTCG GTTCGCTGAT CCTCGACGAG
TACGCCGACT ACATCTGGTA TTGCGTGCAG TGCGCGCTGC TCAAGCGCGA GCCCTATCAG
CTCAGCTACC GCATCCGTTG CGCCGACGGG CGGATCAAGA ACGTCTGGGA GACGGGAGTG
GGTATCTATT CCAGTACCGG CGAGGTGTTG GGGATCGAGG GGGCGATCTT CGAGCGCCAC
GACTGA
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| Protein sequence | MHHASLVLTA APPVPAWEEL TEREGQTLAL IGAGLSNKQI ARELGISDGT VKIYVRSLLR
KFRLSSRLEL ATRLHRRGAS WRMSDEAALP PEGADEGVTA PIAPAAGLLD ELPGLIYRGD
NDRTWFMEYV SAGCLPLTGY PAEYLTRSPQ HSFGSLILDE YADYIWYCVQ CALLKREPYQ
LSYRIRCADG RIKNVWETGV GIYSSTGEVL GIEGAIFERH D
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