Gene Pmen_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3444 
Symbol 
ID5105914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3801209 
End bp3801772 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content65% 
IMG OID640504698 
ProductNUDIX hydrolase 
Protein accessionYP_001188926 
Protein GI146308461 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCC CGCGCTTCTG TCCGCAATGC GGCGACGCCG GCCTCAGCCG CCGGCAGCCG 
GTCGGGGACA CCCACGAACG GCTGATCTGC GCGGCCTGCG GCTACATCCA CTACGAAAAT
CCCAAGGTCA TCGCCGGCTG CATCATCGAG CAGGACGGCA AGTACCTGCT GTGCCAGCGC
GCCATCCCGC CGCGGCCGGG CACCTGGACG CTGCCGGCCG GCTTCATGGA AAACGGCGAA
ACCACCGAAC AGGCCGCCCT GCGCGAAGTC TGGGAGGAAA GCGGCATCCG CGCCGAGATC
GTCTCGCCCT ACTCCATCTT CAGCGTGCCG AAGATCAGCG AGGTGTACAT CATCTTCCGC
GCCACCGTCC TGCAGATCAG CGGCCAGCAC GGCCCGGAAA CCCTTGCCTA CCGCTTCTTC
GCACCCGAGG AAATCCCCTG GGAGAGCATC TACTACCCGG CCATCCGGCA GATTCTCGAG
CGCTATATCG AAGAACGCCA GGCGGGCGTC TACGGCATCT ACATGGGTAA CGACGACTGC
GGCAGAGTGC ACTTTATCCG CTAA
 
Protein sequence
MPSPRFCPQC GDAGLSRRQP VGDTHERLIC AACGYIHYEN PKVIAGCIIE QDGKYLLCQR 
AIPPRPGTWT LPAGFMENGE TTEQAALREV WEESGIRAEI VSPYSIFSVP KISEVYIIFR
ATVLQISGQH GPETLAYRFF APEEIPWESI YYPAIRQILE RYIEERQAGV YGIYMGNDDC
GRVHFIR