Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3444 |
Symbol | |
ID | 5105914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3801209 |
End bp | 3801772 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640504698 |
Product | NUDIX hydrolase |
Protein accession | YP_001188926 |
Protein GI | 146308461 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCC CGCGCTTCTG TCCGCAATGC GGCGACGCCG GCCTCAGCCG CCGGCAGCCG GTCGGGGACA CCCACGAACG GCTGATCTGC GCGGCCTGCG GCTACATCCA CTACGAAAAT CCCAAGGTCA TCGCCGGCTG CATCATCGAG CAGGACGGCA AGTACCTGCT GTGCCAGCGC GCCATCCCGC CGCGGCCGGG CACCTGGACG CTGCCGGCCG GCTTCATGGA AAACGGCGAA ACCACCGAAC AGGCCGCCCT GCGCGAAGTC TGGGAGGAAA GCGGCATCCG CGCCGAGATC GTCTCGCCCT ACTCCATCTT CAGCGTGCCG AAGATCAGCG AGGTGTACAT CATCTTCCGC GCCACCGTCC TGCAGATCAG CGGCCAGCAC GGCCCGGAAA CCCTTGCCTA CCGCTTCTTC GCACCCGAGG AAATCCCCTG GGAGAGCATC TACTACCCGG CCATCCGGCA GATTCTCGAG CGCTATATCG AAGAACGCCA GGCGGGCGTC TACGGCATCT ACATGGGTAA CGACGACTGC GGCAGAGTGC ACTTTATCCG CTAA
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Protein sequence | MPSPRFCPQC GDAGLSRRQP VGDTHERLIC AACGYIHYEN PKVIAGCIIE QDGKYLLCQR AIPPRPGTWT LPAGFMENGE TTEQAALREV WEESGIRAEI VSPYSIFSVP KISEVYIIFR ATVLQISGQH GPETLAYRFF APEEIPWESI YYPAIRQILE RYIEERQAGV YGIYMGNDDC GRVHFIR
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