Gene Pmen_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3412 
Symbol 
ID5105884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3765091 
End bp3765408 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content57% 
IMG OID640504668 
Producthypothetical protein 
Protein accessionYP_001188896 
Protein GI146308431 
COG category[S] Function unknown 
COG ID[COG3323] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.823966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAAC TGTGTTTCTA TGTACCGGAA GCCCACCTGG AGCCGGTGAA AAAGGCGGTT 
TTCGCCGCAG GTGGTGGCCG CATCGGTCGT TATGACAACT GCTGCTGGCA GGTACTCGGA
CAGGGCCAGT TCCGCGCTCT GGAAGGTAGC CAGCCGTTTA TCGGCCAGGT CGACAGCATC
GAGCAGGTTG CCGAATGGAA AGTGGAGATT GTCGTCGCCG ACGAGTTGAT CCACGACGCA
GTCAAGGCCC TGAAGAAGAG CCACCCTTAT GAAACGCCGG CTTTCGACGT CTGGCGTTTG
TCCGATCTGC AGTTCTGA
 
Protein sequence
MYKLCFYVPE AHLEPVKKAV FAAGGGRIGR YDNCCWQVLG QGQFRALEGS QPFIGQVDSI 
EQVAEWKVEI VVADELIHDA VKALKKSHPY ETPAFDVWRL SDLQF