Gene Pmen_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3411 
Symbol 
ID5105883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3764541 
End bp3765044 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID640504667 
Producthypothetical protein 
Protein accessionYP_001188895 
Protein GI146308430 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.69027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGT TGTTGCCCCT GCTCTGCCTG ATCTTCAGCC TCGATGTCCT GGCCAGCACC 
ACGCCGGCGA TCAGCAGCCA TGCAGTGGAC AAGGTGCTGG TCCTCAAGTC GGAACGCAAA
CTGCATCTGC AACGACGCGG CGAGACCATC AAGTCGTACC GCATCTCCCT GGGCAAGCAA
CCCAACGGCG CCAAGCAACG CGAGGGCGAC CTGCGCACAC CGGAAGGTTT CTACTGGATC
GACTGGCGCA AGCCGAGCGA CAAGTACCAG CTGTCGCTGC ACATCTCCTA CCCCAACGCA
CGCGATCTGG CTCGGGCCAA GGAAGCCGGC GTACCGCCGG GCAGCATGAT CATGATCCAC
GGCACGCCGC TGGACGAGGA ATACCCGGAG TGGTTCTTCC ATACCCTGGA CTGGACCGAG
GGCTGTATCG CCATGAAGAA CGACGACATG CGCGAGGTGT GGAGCCTGGT CAAGGATGGC
ACGCTGATCG AAATCAGGCC TTGA
 
Protein sequence
MRWLLPLLCL IFSLDVLAST TPAISSHAVD KVLVLKSERK LHLQRRGETI KSYRISLGKQ 
PNGAKQREGD LRTPEGFYWI DWRKPSDKYQ LSLHISYPNA RDLARAKEAG VPPGSMIMIH
GTPLDEEYPE WFFHTLDWTE GCIAMKNDDM REVWSLVKDG TLIEIRP