| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3383 |
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| Symbol | |
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| ID | 5105855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3733761 |
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| End bp | 3736472 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504639 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_001188867 |
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| Protein GI | 146308402 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.352999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACC CCCACGCTCG CCAGCTCCTC GGCTTCTATC GCAGCTGCTA CCTGGCCGAC
AGTCGCGACC TGGATCTGGA CAACCTCGGC AAGTTGCCCG CCAATCGCTG GGCCTGGCTC
GACGGGCGCG AGGAGCTGGT CAGTGGTGCG CTGACGCTGC TGCCGCTGGC GACCGACCTG
GGGCGGGAAC TGGCCGAGGC GCAGAACCTG TACCAGCGCG AACTGCAACT GGTCTATGGC
GTGCTGCCGA TCTGTGGCCG GCTGCAGCTG GAAAGCGGTG GCGCGCAAAC GGTCTGCGGG
CCGCTGTTCT ACTACGAGGC CAGCCTGCAG CCGACGGCGG ACGGGCAGAG CCAGTTGCTT
GCCATCGATC TGCAGCGGGC TCATGGCAAC TGGCGCCTGC TGCGCCGTGT GTTCGACGAG
AGTGGCGCAG GCAGTCTCGA TGGCTTGCCG CTGCCGGAGG CCGCACTGGA TGCCGTCACG
TTGGGCCAGC TGCTGGCATG GGTGCAGCGC AACACCCAGG TTCGCGAAGT CGGCGAGGCG
GCGGCCTTCC CGCTATTGGC CGAGGCCGAG GAGCTGGCCA GGGCACAGCG CCGCCGCAGC
CTGTCGCTGA TGCCGGGCGC CTGCGTGGCG CTGGTGCCGC GCGGCAGCGG CAGCCGGGGC
ATCGCCCATG AGCTGCAGCT GCTGCAGGAC GCCGAGCGGC TGTCGCCCGC CTTGCTGCAA
TTGCTCGGTG AGAGGCCGGC CACGCAGAAG GCAGGCTCGA CCAGTACGCC GCAGCGCCTG
CCGGCGCAGC TCAGCGCGGC CCAGTGCCAG GCGCTGGCCA ATGCCGCGCG CCATCCGCTG
AGCCAGATTT CCGGGCCGCC CGGTACCGGC AAGAGCTACA GCCTGGCGGC CCTGGCCTTG
GATCGCTACC TGCAGGGCGA GAGCGTGCTG CTGGTCAGCC GCAGCGCCCA GGCGGTGCGA
GTGATCGCGC ACAAGTTGCG CGAGGATTTC GGCCTGCGCG ACGGCGTGCT GGAGGGCGAT
GGCCAGAGCC TGCGCCAGGT CCTGCGCGAG CGCCTGGAGC GGTTGCTGCA GGGCGAATTC
GAGTGGGTGT CGGAGCAGGC CGAAGAGCGC CAGCGCAGCG AACTCCAGGT GCTGACCCAG
GCCGAACGGC GGCTGTCGGT GGATTTTCGC CAACGCTGCG AACAGGCCGT GCGCTGGAGT
CGTCTGCTGC TGCGGGCCGA GCGCGGCAGC CTGGCCTTCT GGCAGCGCTG GCTGCAGGTG
CCCTGGGTGC GCAAGCGTAT CGGCACCAGC GTGCGCCCCT GGGCATTGCT GGACGAACTG
CGCGATTGTC AGCGGCGCCG GCAGCAGCTC AGTCGCGAGC ACCTCAACAG TCATCGCGCG
CTGAACCTCA AGCGCCTGCT GGTCAGCGAC CGTGCGCTGT TCGTGCGTTA CAACCAGGCC
ATCCGCGCGC GCAATTCGCA GCGCCAACTG GCCCTGTTCG AGGACATCGA CCCGGCGCGC
CTGCTGGCCG CCTTCCCGAT CTGGGTGGTG ACCCTTGACG AGCTGCACCG GCTGCTGCCG
CTGCGCCCGG AGCTGTTCGA CGTGATGGTG ATGGACGAGG CGACCCAGTG CGACATCGCC
TCCGCGCTGC CGGCCTTCCA GCGCTGCAAA CGTGCTGTCG TCACCGGTGA TGCGCGTCAG
CTGCGGCATA TCTCCTTCCT TTCCCGGGTG CGCGAGACGC AGCTGTTGCA ACGTGCCGGC
CTGCAGGCCG AAGAGCGCGA GGCCTGGAGT TACCGCGACA ACAGCGTGCT GGATCTGGTC
GGCCTGCAAC TGGCCAGCCA GGAGGCGGTG GTCTTTCTCG ATGAGCATTT CCGCAGCCGT
CCGGCGCTGA TCCGCTTCAG CAACGAGCTG TTCTACGACC AGCGCCTGCG GGTGATGAAG
GAGCGGCCCG GCGGTGAGGC CTGCGACAGC CTGCAGCTGC TGCGCCTCGA GGGCCAGCGT
GGGCGCAACG GTGCCAACGA GGCGGAAGTG GAGCGGGTAC TGGAACTGAT CGCGGCGCAT
CTGGCCGAGT ATCGCGGCAG CCCGCTCAAG CCCAGCATCG GCGTACTGTC GCCGTTTCGC
GATCAGGTCG AGCGCATCCG CCTGCGCATC GGCGAAACCC TGCCGCTGGA GCAATTGCGC
GAGTTCCGCC TGCTGGTGGA TACGCCTTAC GGCTTTCAGG GCGAGGAGCG CGACCTGATG
ATTCTCAGCT TCGCCATCGA TGGCGAGGCC AGCCAGGCTG CGGCCTATCT GAATCGCACC
GATCTGTTCA ACGTCGCCAT CACCCGCGCC CGCGAGCGCC AGGTGCTGCT GTTCAGCGGC
GACGAACGCC AGTTGCCGGC CACGCACCTG CTACGCCGTT ATCTGGAATA CCTCGAGAAG
CCCGGCGCCG CCTGGCAGCC CGGCGCCACC GATGTGGCTC GGCAGAGCCT GTGCCAAGCG
CTGCAGGAGC AGGGCGTCAG CGTGTGGAAC CACTATCCGC TGGCCGGCCA GGTGCTGGAT
CTGTTCTGCC GCCGCGGCGA CAAGTGCCTG GCCATCGACC TGATCGGTTT TCCGGGGGAG
GGCGAGGGCT TCCTCGAACT GGAGCGCTAC CTGGTGCTGG CGCGCGCCGG CCTGGAAACC
CTGCCGCTGA GCTACGGCCT GTGGCGCGAG GCGCCGGAGC AGGCGCTGCA GGCGGTGCTG
CAACGTTTGT AA
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| Protein sequence | MNHPHARQLL GFYRSCYLAD SRDLDLDNLG KLPANRWAWL DGREELVSGA LTLLPLATDL
GRELAEAQNL YQRELQLVYG VLPICGRLQL ESGGAQTVCG PLFYYEASLQ PTADGQSQLL
AIDLQRAHGN WRLLRRVFDE SGAGSLDGLP LPEAALDAVT LGQLLAWVQR NTQVREVGEA
AAFPLLAEAE ELARAQRRRS LSLMPGACVA LVPRGSGSRG IAHELQLLQD AERLSPALLQ
LLGERPATQK AGSTSTPQRL PAQLSAAQCQ ALANAARHPL SQISGPPGTG KSYSLAALAL
DRYLQGESVL LVSRSAQAVR VIAHKLREDF GLRDGVLEGD GQSLRQVLRE RLERLLQGEF
EWVSEQAEER QRSELQVLTQ AERRLSVDFR QRCEQAVRWS RLLLRAERGS LAFWQRWLQV
PWVRKRIGTS VRPWALLDEL RDCQRRRQQL SREHLNSHRA LNLKRLLVSD RALFVRYNQA
IRARNSQRQL ALFEDIDPAR LLAAFPIWVV TLDELHRLLP LRPELFDVMV MDEATQCDIA
SALPAFQRCK RAVVTGDARQ LRHISFLSRV RETQLLQRAG LQAEEREAWS YRDNSVLDLV
GLQLASQEAV VFLDEHFRSR PALIRFSNEL FYDQRLRVMK ERPGGEACDS LQLLRLEGQR
GRNGANEAEV ERVLELIAAH LAEYRGSPLK PSIGVLSPFR DQVERIRLRI GETLPLEQLR
EFRLLVDTPY GFQGEERDLM ILSFAIDGEA SQAAAYLNRT DLFNVAITRA RERQVLLFSG
DERQLPATHL LRRYLEYLEK PGAAWQPGAT DVARQSLCQA LQEQGVSVWN HYPLAGQVLD
LFCRRGDKCL AIDLIGFPGE GEGFLELERY LVLARAGLET LPLSYGLWRE APEQALQAVL
QRL
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