| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3377 |
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| Symbol | |
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| ID | 5105849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3728680 |
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| End bp | 3729324 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640504633 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001188861 |
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| Protein GI | 146308396 |
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| COG category | [K] Transcription |
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| COG ID | [COG5631] Predicted transcription regulator, contains HTH domain (MarR family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.632123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.34347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTGA AAAATCTCCC GAGCGGTCCT GGTCCGTGGT CCCTGTGCTT TGCTGTATGC
TTGCCAGCCA ACTTTCACCT GCGGCCCGCG CGGCCGTTCG CAGTCATGGA TCGCACGATG
GTTGATGCCA AATCCACCCG CTCTCCGCGT TCGCCCATCG TGGCGTCGGC CCACCTGGCC
GAGCAGTCGC AGGAGCTCTC CGAACTCGAG TTCGCCATCA TCATCTCCAG CAACGCCTTT
CTGCGCTGGA TGGAGCGCTG CATGCGCGCG GCCGGCGAAG TGGAGATGAA CGCCCTCGAC
GTGATGGTCC TGCACAGCCT GACCAGTCGC GATCGCGCCA AGCGCCAGGC GGACATCTGC
CTGCTGCTGA ACATCGAAGA CACCCATACC GTTACCTATG CGCTGAAGAA ACTGGCCAAG
CTGGCGCTGG TGGAGGGCGA GAAGCAGGGC AAGGAGATGT TCTACCGCAC TACCGAAAAG
GGCCGTGCCC TGTGCCAGGA GTACGCCGAC ATCCGCCGCG AATGCCTGAT CGCCTCGTTC
GAGAACCTCA ACATCGACCC CGAGGAAATC CATCGCCTGG CCGGCATGCT CAGGGCCATG
TCCGGCCTCT ACGACCAGGC CGCCCGCGCC GCCACCTCGC TTTGA
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| Protein sequence | MFLKNLPSGP GPWSLCFAVC LPANFHLRPA RPFAVMDRTM VDAKSTRSPR SPIVASAHLA
EQSQELSELE FAIIISSNAF LRWMERCMRA AGEVEMNALD VMVLHSLTSR DRAKRQADIC
LLLNIEDTHT VTYALKKLAK LALVEGEKQG KEMFYRTTEK GRALCQEYAD IRRECLIASF
ENLNIDPEEI HRLAGMLRAM SGLYDQAARA ATSL
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