| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3376 |
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| Symbol | |
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| ID | 5105848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3726923 |
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| End bp | 3728632 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504632 |
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| Product | exonuclease RecJ |
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| Protein accession | YP_001188860 |
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| Protein GI | 146308395 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.593595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG ATCTACGCCC CCTACCCGCA AGCCTGCCCG ACCTGGGCAA CCTGCCGCCG
CTGTTGACCC GCCTCTACGC CGCCCGTGGC GTGCAGTGCG CCGAAGAATT GGACAAGGGC
CTGGCGCGGT TGATCCCCTT TCAGCAGCTC AAGGGCATCG ATGCGGCGGT CGAACTGCTG
GTCGAGGCGC TGCAGCGGCG CCAGCGCATC CTCATCGTCG GCGACTTCGA TGCCGATGGC
GCCACCGCCA GCTCGGTCGG CGTGCTCGGC CTGCGCCAGC TCGGCGCGGC GCATGTCGAC
TATCTGGTGC CGAACCGCTT CGAGTACGGC TATGGCCTGA CGCCGGAAAT CGTCGCCGTG
GCGCTGCAGC GCCAGCCCGA TCTGTTGCTG ACCGTGGACA ACGGCATCTC CAGCGTCGAT
GGCGTGGCCG CGGCCAAGGC CGCCGGGCTC AAGGTGCTGG TCACCGATCA CCACCTGCCG
GGCCCGGAAC TGCCGGCGGC CGATGCCATC GTCAACCCCA ACCAGCCGGG CTGCGACTTC
CCGAGCAAGG CCATGGCCGG TGTCGGGGTG ATGTTCTACG TGCTGCTGGC GCTGCGCGCG
CGTCTGCGCG AGCTGGGCTG GTTCGCCAGC CGCCAGGAGC CGAACCTGGG CGAGCTGCTC
GATCTGGTGG CCCTCGGCAG CGTCGCCGAC GTGGTGCCGC TGGATGCCAA CAACCGCATC
CTGGTGCACC AGGGCCTCGC GCGTATTCGT GCCGGTCGGG CGCGGCCCGG GCTGCGCGCG
ATACTCGAAG TGGCCGGGCG CGACCACCGG CGCATCACTT CCACCGATCT CGGTTTCATC
CTCGGCCCGC GACTGAATGC GGCCGGGCGT CTGGACGACA TGAGCCTGGG CATCGAATGC
CTGCTCTGCG ACGACGAAGC GCTGGCCCGC GACATGGCGG TGCAGCTCGA TCAGCTCAAC
CAGGACCGCA AGGCCATCGA ACAGGGCATG CAGCGCGAGG CGCTGGCCCA GCTCAAGGAC
CTGCCGCTGC AGGACATGCC GTTCGGCCTG TGCCTGTTCG AACCTGACTG GCACCAGGGA
GTGATCGGCA TCCTCGCCTC GCGCCTGAAG GAACGCTATC ACCGCCCGGC CATCGCCTTT
GCCGATGCCG GTGAGGGCAT GCTCAAGGGC TCGGCACGCT CGGTGCCGGG GCTGCATATC
CGCGATGCGC TGGACGCCGT GGCGGCGCGC CATCCGGGGC TGATCAGCAA GTTCGGCGGG
CACGCCATGG CCGCCGGCCT GTCGTTGCCG CAGGAAAACT TCGGCGCCTT CGCGGCTGCC
TTCGACGCCG AGGTGCGCCG TCAGTTGTGC GAGGACGATT TGACCGGCCG CCTGCTGTCC
GACGGCCAGC TCGACGCCAC CGAATTCCAC CTGGAACTGG CTCGCGCCCT GCGCAACGCC
GGGCCCTGGG GCCAGCATTT CCCCGAGCCG CTGTTCCATG GCGTGTTCCA GATCGTGGGT
CAGCGCATCG TCGGCGAGCG GCACCTGAAG CTGGTGCTCA AGACCGAGTG CGGCAGCGTG
CAGCTCGACG GCATCGCCTT CAACATCGAC CGCGAGGTCT GGCCCAACCC GACGCTGCGC
TGGGCCGAAG TGGCCTACAA GCTCGATCTC AACGAGTTTC GCGGCAACGA GAGCGTGCAG
TTGATGGTGG CGCATATCGC GCCGCGCTGA
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| Protein sequence | MRIDLRPLPA SLPDLGNLPP LLTRLYAARG VQCAEELDKG LARLIPFQQL KGIDAAVELL
VEALQRRQRI LIVGDFDADG ATASSVGVLG LRQLGAAHVD YLVPNRFEYG YGLTPEIVAV
ALQRQPDLLL TVDNGISSVD GVAAAKAAGL KVLVTDHHLP GPELPAADAI VNPNQPGCDF
PSKAMAGVGV MFYVLLALRA RLRELGWFAS RQEPNLGELL DLVALGSVAD VVPLDANNRI
LVHQGLARIR AGRARPGLRA ILEVAGRDHR RITSTDLGFI LGPRLNAAGR LDDMSLGIEC
LLCDDEALAR DMAVQLDQLN QDRKAIEQGM QREALAQLKD LPLQDMPFGL CLFEPDWHQG
VIGILASRLK ERYHRPAIAF ADAGEGMLKG SARSVPGLHI RDALDAVAAR HPGLISKFGG
HAMAAGLSLP QENFGAFAAA FDAEVRRQLC EDDLTGRLLS DGQLDATEFH LELARALRNA
GPWGQHFPEP LFHGVFQIVG QRIVGERHLK LVLKTECGSV QLDGIAFNID REVWPNPTLR
WAEVAYKLDL NEFRGNESVQ LMVAHIAPR
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