| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3369 |
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| Symbol | |
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| ID | 5105841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3717634 |
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| End bp | 3718347 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504625 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001188853 |
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| Protein GI | 146308388 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.15346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTTCCG TGCCTGCCTC TCCGAATGCC ACCCAGGCGG CCACCGCCGT CGCCGAAAGC
GTCCAGTATC AGGGCCGCAA GGCCAGCCGT CAGGGCAGCG AGCAGCGTCG CCAGGCGATC
CTCGACGCCG CCATGCGCAT CATCGTGCGT GAGGGCGTGC GCGCCGTGCG CCATCGCGCC
GTGGCAGCCG AGGCGCAGGT GCCGCTGTCG GCCACCACCT ACTACTTCAA GGATATCGAT
GACCTGATCA CCGATACCTT CGCCCAGTTC GTCGAGCGCA GCGCCGCGCA CATGGCGGCC
TTCTGGGCCA GCACCCAAGG CCTGCTGGAG GACCTGGTGG GGCGTCTCGA CGGCAGCGAG
GCTGCGCGCC GGCAACTGGC CGACGAGATC GCCGGACTGG CGGTGCAGTA CGTGCAGCGG
CAGTTGCGCG AGCGCCGCGA TCACCTGATC GCCGAGCAGG CCTTCCAGCA GGAGGCGCTG
CTCAATCCGC GTCTGCGCGA CCTGGTACGC GCCCATCGGC AGATCCTGCA GCAGGGCGTC
ACCCACTTCT TCGAGGTGCT CGGCTCACGC CAGCCGGAGC AGGATGCCGT GCTGTTGACG
GCCGCCATCG TGCGGATGGA GTATCAGGGC CTGCTGGACG GTGTCGAGCA CCTGGACAGC
GAGGGAATGC TGGCCATCCT TAAACGCTAC ATGAACCTGG TTCTGGGGTT GTAA
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| Protein sequence | MTSVPASPNA TQAATAVAES VQYQGRKASR QGSEQRRQAI LDAAMRIIVR EGVRAVRHRA
VAAEAQVPLS ATTYYFKDID DLITDTFAQF VERSAAHMAA FWASTQGLLE DLVGRLDGSE
AARRQLADEI AGLAVQYVQR QLRERRDHLI AEQAFQQEAL LNPRLRDLVR AHRQILQQGV
THFFEVLGSR QPEQDAVLLT AAIVRMEYQG LLDGVEHLDS EGMLAILKRY MNLVLGL
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