Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3357 |
Symbol | |
ID | 5105829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3706185 |
End bp | 3706868 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640504613 |
Product | peptidase M22, glycoprotease |
Protein accession | YP_001188841 |
Protein GI | 146308376 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.756151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTC TCCTGGCCCT GGATACCGCC ACCGAAGCCT GCTCCGTCGC GCTGCTGCAT GACGGTCGCG TGCTCAGCCA CTACGAGGTT GCCCCGCGCC TGCATGCGCA ACGCCTGTTG CCGATGATTC AGCAACTGCT GGGCGACTCC GGCATCGCCG CCTCGGCGCT GGATGCCATC GCCTTTGGCC GTGGCCCGGG CGCCTTCACG GGCGTACGTA TCGCCATCGG CGTGGTTCAG GGCCTGGCCT TTGCCCTGGA CCGGCCGGTG TTGCCAATAT CCAATCTGGC CGTGCTGGCC CAGCGTGCGC TGCGTGAGCA GGGCGCGACC CAGGTGGCGG CAGCCATCGA CGCGCGCATG GATGAGGTGT ACTGGGGCTG CTACCGCGCC GATGCCGGCG AGATGCGTCT GCTCGGCGAG GAGGCGGTGC TGCCGCCGGA GCAGGCCGAG GTGCCGCGTG GCAGCAGCGG TGACTGGTTC GGCGCTGGTA CCGGTTGGGG CACCTATGCC GCGCGTATCG CGCTCAAGCC CACTCATATG GATGGTAGCC TGCTGCCGCA CGCCGAAGAC CTGCTCGCTC TGGCCCGTTT TGCCTGGGCG CGTGGCGAGG CGTTGCCGGC CGATCAGGCC CAGCCGGTGT ACCTGCGCGA TCAGGTCGCG ACACCCAAGG CGCCGTCGGC ATGA
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Protein sequence | MTTLLALDTA TEACSVALLH DGRVLSHYEV APRLHAQRLL PMIQQLLGDS GIAASALDAI AFGRGPGAFT GVRIAIGVVQ GLAFALDRPV LPISNLAVLA QRALREQGAT QVAAAIDARM DEVYWGCYRA DAGEMRLLGE EAVLPPEQAE VPRGSSGDWF GAGTGWGTYA ARIALKPTHM DGSLLPHAED LLALARFAWA RGEALPADQA QPVYLRDQVA TPKAPSA
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