Gene Pmen_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3346 
Symbol 
ID5105818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3694231 
End bp3694701 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content68% 
IMG OID640504602 
ProductybaK/ebsC protein 
Protein accessionYP_001188830 
Protein GI146308365 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAG CCATCGACCT GTTGAAGAAA GCCAAGGCCG TGCACCGGGT GCATAGCTAT 
CAGCACGATC CCAAGGCCCC GTCCTATGGG CTGGAGGCGG CGGAAAAACT CGGCCTGGCA
CCTGCGCAGG TGTTCAAGAC CCTGCTCGCC GCGACCGAGA AGGGCGAGCT GCTGGTGGCG
GTGGTACCGG TTGCCGGCAG TCTCGACCTC AAGGCGCTGG CGCTGGCCGC CGGAGCGAAG
AAGGCGGACA TGGCCGACCC GGCCGCGGCC CAGCGCGCCA CCGGTTACCT GCTGGGCGGC
ATCAGCCCGC TGGGGCAGAA GAAGCGTCTG CGTACCTTCA TCGACAGCTC GGCCCGCAAC
CATTCCAGCA TCTACGTCAG CGCCGGGCGG CGCGGCCTGG AGGTGGAACT GGCGGCCGAG
GTGCTGGCGC AGCTCACCCA GGCCGGTTTC GCCGAAATCG GTCGCCCATG A
 
Protein sequence
MTPAIDLLKK AKAVHRVHSY QHDPKAPSYG LEAAEKLGLA PAQVFKTLLA ATEKGELLVA 
VVPVAGSLDL KALALAAGAK KADMADPAAA QRATGYLLGG ISPLGQKKRL RTFIDSSARN
HSSIYVSAGR RGLEVELAAE VLAQLTQAGF AEIGRP