Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3338 |
Symbol | |
ID | 5105810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3685771 |
End bp | 3686109 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640504594 |
Product | hypothetical protein |
Protein accession | YP_001188822 |
Protein GI | 146308357 |
COG category | [S] Function unknown |
COG ID | [COG3784] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0658151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGTT ACATTTCGAC CCTGTTGCTG GCATTGAGCC TGAGCCTGCC GGCCTACGCA CTGAACCTCA ACCAGGCCAT GAGCGCACTC GGCGAGGCCA AGAGCAGCGG GCAGCTAGGC GAGCAACCCA ACGGCTACCT CGGCGTGGTC AAGCCCGGTG GCCAGGCCGA GGAAATCGCC CGCCTGATCA ACCAGGCGCG CCGTGCCGAG TATCAGAAGG TGGCGCAGGA CAACGGCATC AGCCTGAGCG ATGTCGAAGC CATCGCCGGC AAGAAGGCCA TCGAGCGCAC GCCGAAGGGA CAGTTCATCC AGCTCAATGG CCAGTGGTTG CAGAAGTGA
|
Protein sequence | MIRYISTLLL ALSLSLPAYA LNLNQAMSAL GEAKSSGQLG EQPNGYLGVV KPGGQAEEIA RLINQARRAE YQKVAQDNGI SLSDVEAIAG KKAIERTPKG QFIQLNGQWL QK
|
| |