Gene Pmen_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3338 
Symbol 
ID5105810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3685771 
End bp3686109 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content63% 
IMG OID640504594 
Producthypothetical protein 
Protein accessionYP_001188822 
Protein GI146308357 
COG category[S] Function unknown 
COG ID[COG3784] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0658151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTT ACATTTCGAC CCTGTTGCTG GCATTGAGCC TGAGCCTGCC GGCCTACGCA 
CTGAACCTCA ACCAGGCCAT GAGCGCACTC GGCGAGGCCA AGAGCAGCGG GCAGCTAGGC
GAGCAACCCA ACGGCTACCT CGGCGTGGTC AAGCCCGGTG GCCAGGCCGA GGAAATCGCC
CGCCTGATCA ACCAGGCGCG CCGTGCCGAG TATCAGAAGG TGGCGCAGGA CAACGGCATC
AGCCTGAGCG ATGTCGAAGC CATCGCCGGC AAGAAGGCCA TCGAGCGCAC GCCGAAGGGA
CAGTTCATCC AGCTCAATGG CCAGTGGTTG CAGAAGTGA
 
Protein sequence
MIRYISTLLL ALSLSLPAYA LNLNQAMSAL GEAKSSGQLG EQPNGYLGVV KPGGQAEEIA 
RLINQARRAE YQKVAQDNGI SLSDVEAIAG KKAIERTPKG QFIQLNGQWL QK