Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3334 |
Symbol | |
ID | 5105806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3681520 |
End bp | 3682272 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640504590 |
Product | hypothetical protein |
Protein accession | YP_001188818 |
Protein GI | 146308353 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000192375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCT GGCAACTATG CGAAGGTGAA CGACAGGTTC GACCGTTGCG CGGCAAGCTG CTGCGCATGG TGGAGAGCCA GGCGCAAGTC GCCACCCTGC AACTGGTCGA TACCCTGGCC GAACAGGCTC TGCTGGAAGA GTTGCTCGAA GCCAGCAAGC CGCCGCTGCC GCAGGGCAGC GAGCAGCTGC ACTACCTGCT GAAGACGCCG TTTCGCTATC CGCCGCTGCG CTGGGGCTCG CGTTTTGGCA CGGTGCACGA ACCCAGCCTG TTCTACGCGG CCTTGCGACT GGAAACGGCG ATGGCCGAGG CGGCCTACTA TCGCTTTGTG CTGTGGAACG GCATGGTCAG TCCGCCGCCC AGCGGGCGCA TCCTTTCCGA ACATTCCACC TTCGAGGCGC GCTATCGGGT CGAGCGCGGC ATTCAGTTGC AGCAGCCGCC ATTCGACCTG CATCGCGAGT TGCTGGCCCA TCCCAGCGAT TACAGCGTGC CGCAACGTCT GGGGGCGGCG ATGCGAGCGG CCGGCATCGA GGCCTTCGAG TACCGCTCGG CGCGCTGCCC GGCCGGTGGC AGCAATGTTG CGCTGTACGT TCCCGGTGCG TTTGCGGAAA AGCGACCACG CAACCTGACC GCCTGGCTGT GCGAAACCAC CGGCGAATAC GTGGCCTTCA AGCATGCCCA GACCCCCGAT CAGCCGCGGC TGTTTCGCTG GGAGCAGTTC CTGGTTCAAG GGCAGTTGCC GCAGCCCGCA TGA
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Protein sequence | MDIWQLCEGE RQVRPLRGKL LRMVESQAQV ATLQLVDTLA EQALLEELLE ASKPPLPQGS EQLHYLLKTP FRYPPLRWGS RFGTVHEPSL FYAALRLETA MAEAAYYRFV LWNGMVSPPP SGRILSEHST FEARYRVERG IQLQQPPFDL HRELLAHPSD YSVPQRLGAA MRAAGIEAFE YRSARCPAGG SNVALYVPGA FAEKRPRNLT AWLCETTGEY VAFKHAQTPD QPRLFRWEQF LVQGQLPQPA
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