Gene Pmen_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3334 
Symbol 
ID5105806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3681520 
End bp3682272 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content65% 
IMG OID640504590 
Producthypothetical protein 
Protein accessionYP_001188818 
Protein GI146308353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000192375 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCT GGCAACTATG CGAAGGTGAA CGACAGGTTC GACCGTTGCG CGGCAAGCTG 
CTGCGCATGG TGGAGAGCCA GGCGCAAGTC GCCACCCTGC AACTGGTCGA TACCCTGGCC
GAACAGGCTC TGCTGGAAGA GTTGCTCGAA GCCAGCAAGC CGCCGCTGCC GCAGGGCAGC
GAGCAGCTGC ACTACCTGCT GAAGACGCCG TTTCGCTATC CGCCGCTGCG CTGGGGCTCG
CGTTTTGGCA CGGTGCACGA ACCCAGCCTG TTCTACGCGG CCTTGCGACT GGAAACGGCG
ATGGCCGAGG CGGCCTACTA TCGCTTTGTG CTGTGGAACG GCATGGTCAG TCCGCCGCCC
AGCGGGCGCA TCCTTTCCGA ACATTCCACC TTCGAGGCGC GCTATCGGGT CGAGCGCGGC
ATTCAGTTGC AGCAGCCGCC ATTCGACCTG CATCGCGAGT TGCTGGCCCA TCCCAGCGAT
TACAGCGTGC CGCAACGTCT GGGGGCGGCG ATGCGAGCGG CCGGCATCGA GGCCTTCGAG
TACCGCTCGG CGCGCTGCCC GGCCGGTGGC AGCAATGTTG CGCTGTACGT TCCCGGTGCG
TTTGCGGAAA AGCGACCACG CAACCTGACC GCCTGGCTGT GCGAAACCAC CGGCGAATAC
GTGGCCTTCA AGCATGCCCA GACCCCCGAT CAGCCGCGGC TGTTTCGCTG GGAGCAGTTC
CTGGTTCAAG GGCAGTTGCC GCAGCCCGCA TGA
 
Protein sequence
MDIWQLCEGE RQVRPLRGKL LRMVESQAQV ATLQLVDTLA EQALLEELLE ASKPPLPQGS 
EQLHYLLKTP FRYPPLRWGS RFGTVHEPSL FYAALRLETA MAEAAYYRFV LWNGMVSPPP
SGRILSEHST FEARYRVERG IQLQQPPFDL HRELLAHPSD YSVPQRLGAA MRAAGIEAFE
YRSARCPAGG SNVALYVPGA FAEKRPRNLT AWLCETTGEY VAFKHAQTPD QPRLFRWEQF
LVQGQLPQPA