Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3305 |
Symbol | |
ID | 5105778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3647939 |
End bp | 3648694 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640504562 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001188790 |
Protein GI | 146308325 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATGC AAAACACCCA ACCTCGTGCT CGTCGCAAGC ACCGCAGCCT GGCTCAGGAG CTGGTGGCCG AGCTGTCGCA GCGCATTCGC GATGGGGTGA TCAAGCGCGG TGAAAAGCTG CCGACCGAGT CGGCGATCAT GGAAGAGCAG GGCGTCAGCC GCACCGTGGT GCGCGAGGCG CTGTCGCGGC TGCAGGCCGC CGGCCTGGTG GAAACCCGCC ACGGCATCGG TACCTTCGTG CTCGACACCC CCAGTGCCAG CGGTTTTCGC ATCGACCCGG CGACCATTGT CACCCTGCGC GATATCCTGG CGATTCTCGA ACTGCGCATC AGCCTGGAAG TGGAGTCCGC GGGCATGGCG GCGCAGCGGC GCAGCGAGGC GCAGCTCAAA GCCATCCGCG AGGCGCTGGA TGCCATCAAC GAGAGTGCGG CGCACGCCAG CGACGCGGTC TCCTCGGACT TCCAGTTCCA TCTGCGCATC GCCGAGGCGA CCGGCAACCG GTACTTCACC GATATCCTCA GCCATCTGGG TACCAGCATC ATCCCGCGTA CCCGGGTCAA TTCCGCCAGC CTTGCGCGTG ACGATCAGAC CCACTACATG GCGCGGCTGG AGCGCGAGCA CGAGCAGATC TTCGAGGCCA TCGCCCGCCA GGATGCCGAG GCGGCGCGGG CGGCCATGCG TCTGCACCTG ACCAACAGTC GCGAGCGTCT GCGTCAGGCG CATGAGGCAG CCGAGGCCGA GGCGCTGCAC GGCTGA
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Protein sequence | MEMQNTQPRA RRKHRSLAQE LVAELSQRIR DGVIKRGEKL PTESAIMEEQ GVSRTVVREA LSRLQAAGLV ETRHGIGTFV LDTPSASGFR IDPATIVTLR DILAILELRI SLEVESAGMA AQRRSEAQLK AIREALDAIN ESAAHASDAV SSDFQFHLRI AEATGNRYFT DILSHLGTSI IPRTRVNSAS LARDDQTHYM ARLEREHEQI FEAIARQDAE AARAAMRLHL TNSRERLRQA HEAAEAEALH G
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