| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3299 |
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| Symbol | |
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| ID | 5106806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3642189 |
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| End bp | 3643016 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504556 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001188784 |
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| Protein GI | 146308319 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA CTCCCAGCGA GCTTCGCCCC TTCAATCGCC TGCTGCTCAC CGGTGCCGCC
GGTGGCCTGG GCAAGGTACT GCGCCAGCGC CTGCGCCCCT ACGCCAATGT CATGCGTCTG
TCCGATATCG GCGAGATGGC GCCGGCCGAA GGCCCACACG AAGAAGTGGT GCACTGCGAT
CTGGCCGACA AGGCCGGCGT GCAGCAACTG GTCGAAGGCG TCGATGCCAT CGTGCATTTC
GGCGGCGTCT CGGTCGAGCG CCCGTTCGAG GAAATTCTCG GCGCCAACAT CTGCGGCGTG
TTCCATATCT ACGAAGCGGC CCGCCGCCAT GGCGTGAAGC GCGTGGTGTT CGCCAGCTCC
AACCATGTGA TCGGTTTCTA CAAGCAGGAC GAGCGCCTCG ACGCCCATTC TCCGCGCCGG
CCGGACGGCT ACTACGGGCT GTCCAAGTCC TACGGCGAGG ACATGGCCAG CTTCTATTTC
GACCGCTACG GCATCGAGAC CGTGAGCATC CGCATCGGCT CTTCCTTCCC CGAGCCGGCC
AACCGCCGAA TGCTGAGCAC CTGGCTGAGC TATGACGATC TCACCCAGCT GATCGAACGC
GCCCTCTATA CCGCGAATGT CGGCCACACC GTGGTCTACG GCATGTCGGA TAACCGCGAA
GTGTGGTGGG ACAACAGCCA GGCCGCGCAC CTGGGCTTCA CGCCCAAGGA CAGCTCGGAC
GTGTTCCGCG ACAAGGTGGA GGCACAACCC ATGCCGGCCG CCGACGATCC GGCGCGCATC
TATCAGGGCG GCGCCTTCGT TGCCGCGGGG CCCTTCGGCG ACGATTGA
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| Protein sequence | MTTTPSELRP FNRLLLTGAA GGLGKVLRQR LRPYANVMRL SDIGEMAPAE GPHEEVVHCD
LADKAGVQQL VEGVDAIVHF GGVSVERPFE EILGANICGV FHIYEAARRH GVKRVVFASS
NHVIGFYKQD ERLDAHSPRR PDGYYGLSKS YGEDMASFYF DRYGIETVSI RIGSSFPEPA
NRRMLSTWLS YDDLTQLIER ALYTANVGHT VVYGMSDNRE VWWDNSQAAH LGFTPKDSSD
VFRDKVEAQP MPAADDPARI YQGGAFVAAG PFGDD
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