| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3288 |
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| Symbol | |
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| ID | 5106795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3633738 |
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| End bp | 3634448 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504545 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001188773 |
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| Protein GI | 146308308 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTG CCAGCTTTCC CATCCTGATC ACCGGCGCCG GCCAGAGGGT CGGCCTGTAC
TGCGCCGAGC GCCTGCTCGA CGAGGGCCAA CCGGTGATCG TCAGCTATCG CCAGGAGCGC
GACAGCATTG CGCGCCTGCG TGAGCGCGGC GCCATCGCCG TGCAGGCGGA CTTCAGCGCC
GAGGCCGGCA TCCTCAGCTT CATCGCCCAG ATCAAGGCGC AGTGCAGCGG CCTGCGCGCG
ATCGTGCACA ACGCCTCGCA GTGGCTGGCC GAAACGCCGG GCGAGGAGGC CGAGGCCTTC
CGCCAGCTGT TCGCCGTGCA CATGCTCGCG CCCTACCTGA TCAACCTGCA TTGCAGCGAC
CTGCTGCTGC AGTCGCAGCG CGCCGACATC GTCCACGTCA GCGACGACGT GGTACGCAAG
GGCAGCGCCA ATCGCCCGGC CTACTGCGCC AGCAAGGCCG GGCTGGAAAG CCTGACGCTT
TCCTTCGCCG CCCGCCTGGC GCCACGCATC AAGGTCAACG CCATCGCTCC AGCGCTGCTG
ATGTTCAACG CGGGCGATGA CGAGGCCTAC AGGAGCAAGA CCTTGGCCAA GTCGGCGCTG
GGCATAGAAC CCGGCCCGCA AGCCTTCTAC CAGAGTTTGC GCTACCTGCT GGACAACCCC
TACGTAACCG GAACGACCCT TACCCTCAAC GGCGGCCGCC ACCTCAAGTG A
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| Protein sequence | MSAASFPILI TGAGQRVGLY CAERLLDEGQ PVIVSYRQER DSIARLRERG AIAVQADFSA
EAGILSFIAQ IKAQCSGLRA IVHNASQWLA ETPGEEAEAF RQLFAVHMLA PYLINLHCSD
LLLQSQRADI VHVSDDVVRK GSANRPAYCA SKAGLESLTL SFAARLAPRI KVNAIAPALL
MFNAGDDEAY RSKTLAKSAL GIEPGPQAFY QSLRYLLDNP YVTGTTLTLN GGRHLK
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