| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3274 |
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| Symbol | |
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| ID | 5106781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3623358 |
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| End bp | 3623939 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504531 |
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| Product | PfpI family intracellular peptidase |
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| Protein accession | YP_001188759 |
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| Protein GI | 146308294 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCA AGAAGATTCT GATGCTGGTC GGCGACTACG CCGAAGATTA CGAAACCATG
GTGCCGTTCC AGGCGCTGCA GATGGTCGGT CACACCGTGC ATGCGGTCTG TCCGGACAAG
GTCACCGGGC AGACGGTGCG TACCGCCATT CACGATTTCG AGGGCGACCA GACCTACAGC
GAGAAGCCTG GGCACAACTT CGCGCTCAAC TTCGACTTCG CCAAGGTCAG TGCCGAAGAT
TACGACGCCC TGGTCATCCC CGGCGGGCGC GCGCCGGAGT ACCTGCGCCT GAATGGCGAC
GTCGTGGCGT TGGTCAAGGC CTTCGCCAAG GCCGACAAGC CCATCGCTGC GGTCTGCCAC
GGCGCCCAGC TGCTGGCAGC GGCCGGCGTG CTGGAGGGGC GTGAATGCAG CGCCTATCCT
GCCTGTGCGC CGGAAGTGGC GCTGGCTGGT GGCACGTATG TGGATATCCC GGTGGATCAG
GCCCATGTGC AGGACAACCT GGCGACGGCG CCGGCCTGGC CTGCGCACCC GGCCTGGCTG
GCCGGTTTCC TCAAGCTGCT GGGCACCGAG ATCCGCCTGT AG
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| Protein sequence | MAAKKILMLV GDYAEDYETM VPFQALQMVG HTVHAVCPDK VTGQTVRTAI HDFEGDQTYS
EKPGHNFALN FDFAKVSAED YDALVIPGGR APEYLRLNGD VVALVKAFAK ADKPIAAVCH
GAQLLAAAGV LEGRECSAYP ACAPEVALAG GTYVDIPVDQ AHVQDNLATA PAWPAHPAWL
AGFLKLLGTE IRL
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