| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3237 |
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| Symbol | |
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| ID | 5106744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3586312 |
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| End bp | 3588618 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504494 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001188722 |
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| Protein GI | 146308257 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCT CGATGAAATG CCTGCGTCAG TTCGCTCTTG CCGCCCTGTT CGTCTCTCCC
ACTCTGCTCG CCGCCGCGCC CTCGCTCGAT GACCGTTCGG CCTTCATCGC CGATCTGCTG
GGGCGCATGA CCCTGGAGGA AAAGGTCGGG CAGCTGCGCC TGATCAGCAT CGGTGGCGAC
ATGCCGCGCG AACGCATCGT CGAGGAGATG GCCGCCGGCC GCATCGGCGC CACCTTCAAT
TCGGTGGTGC GCCCGGACAA CCGGCCGATG CAGGAGGCGG CGTTGCGCAG TCGCCTGGGC
ATCCCGGTGT TCTTCGCCTA CGACATCATC CACGGTCACC GCACCACCTT TCCCATCGGC
CTGGGCCTGG CCTCGAGCTG GGACATCGAG GCCATCGAGA ACAGTGCGCG CATCGCCGCC
CTGGAGGCCA GTGCCGACGG CCTGGACATG ACCTTCGCGC CGACCGTGGA CATCTCCCGC
GATCCGCGCT GGGGGCGCAC CTCCGAGGGC TTCGGCGAGG ACCCCTACCT GGTGTCGCGC
ATCGCTGCCG CCATGGTGCG CGGCTTCCAG GGCAAGGACC CCAGCGACCC ACAGCGCATC
ATGGCCAGCG TCAAGCATTT CGCCCTGTAC GGCGCGGTGG AGGGCGGGCG CGATTACAAC
GTGGTCGACA TGAGCCCGCT GCGCATGTAC CAGGATTATC TGCCGCCCTA TCGCGCCGCC
ATCGACGCCG GTGCCGGCGG GGTGATGGTG GCCCTGAATG CGGTCAACGG CGTGCCGGCC
TCGGCCAACA AATGGCTGCT GGATGACCTG CTGCGCCGGC AGTGGGGCTT CAAGGGGGTG
GTGCTCAGCG ATCACGGCGC GATCACCGAG CTGCTGCGCC ATGGCGTGGC GGCCGATGGT
CGCGAGGCCG CGCGCCTGGC GATCAGCGCC GGTGTCGGCA TGAGCATGGC CGACACGCTC
TACGATCAGG AACTGCCGGC GCTGGTACGT AGCGGCGCGG TCGCGCAGAG CGTGCTGGAT
GAAGCGGTCA CCCATGTGCT GAACACCAAG TACGACCTCG GCTTGTTCCA CGACCCGTTC
CGCCGCATCG GCCGCGCCGA GGACGATCCG GCGGACGTCA ACGCCGAGAG CCGCCTGCAC
CGCGCCGACG CGCGGGCCAT GGCGCGCGAT TCGCTGGTGC TGCTGGAGAA CCGTGGCGAC
ACCCTGCCGC TGCGCAAGAA CGCCACCGTG GCGCTGATCG GCCCGCTGGC CGACTCGCAG
GTGGACATGC TCGGCAGCTG GTCGGCGGTC GGCGTGGCCG AGCAGGCGGT GACGCTGCGC
CAGGGCATGG AGGCGGCGCT CGCCGGGCAG GGCAAGCTGC TCCATGCCGT GGGCGCCAAC
ATCACCGACG ATGCCCGGGT CATCGATTAC CTCAACCAGC TCAACTGGGA CCGCCCGGAA
GTGGTGCCGG ACAAGCGCAC GCCGCAGGCG ATGCTGGACG AAGCCGTTGC CCTGGCCGCC
CAGGCCGACG TGATTGTCGC CGCGGTGGGC GAGGCGCGCG GCATGTCCCA CGAATCCTCC
AGCCGCACCC GTCTGGATTT GCCGGACAGC CAGCAGGCCT TGCTGCGCGC GCTCAAGGCC
ACCGGCAAAC CGCTGGTACT GGTACTGATG AATGGCCGCC CGCTGGCGCT GGGCTGGGAG
AAGGACAACG CCGATGCGAT CCTGGAAACC TGGTACAGCG GCATCGAGGG CGGCCACGCC
ATCGCCGATG TGCTGTTCGG CGAGCACAAC CCTTCGGGCA AGCTGCCGAT CAGCTTCCCG
CGTTCGGTCG GGCAGATTCC CACCTATTAC AACCACCTGC GCCTGGGGCG TCCCTACACA
CCGGGCACGC CCGGCAACTA CACCTCGCAA TACTTCGAGG AGGCCACCGG CCCGCTCTAT
CCCTTCGGCT ACGGCCTGAG CTACAGCGAC TTCCAGCTGT CGGCGCCGAA GCTGTCCGCC
GAGCGCATGC ACCCGGATCA GCGCATCCGC GTCAGCGTCA CGCTGAAGAA CGCCGGTCCA
CGTCCCGGGG CCACCGTGGT GCAGCTCTAC CTGCATGACG AGGCCGCTTC GGTGATCCGT
CCGGAGAAGG AACTCAAGGC GTTTCGCAGG GTCAAGCTTG AAGCGGGCGA GGCGCGCGAG
CTGAGCTTCG AGATCGACGA AAGCATGCTG CGTTTCTTCG ATGCCAGCCT GCAACACGTC
AGCGAGCCGG GTGCCTTCCG GGTTCAGCTC GGGCTGGATT CGCAGGCGGT GCAGGAGGCC
CGTTTCGAAC TGCTGCCGCG CCCCTGA
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| Protein sequence | MPLSMKCLRQ FALAALFVSP TLLAAAPSLD DRSAFIADLL GRMTLEEKVG QLRLISIGGD
MPRERIVEEM AAGRIGATFN SVVRPDNRPM QEAALRSRLG IPVFFAYDII HGHRTTFPIG
LGLASSWDIE AIENSARIAA LEASADGLDM TFAPTVDISR DPRWGRTSEG FGEDPYLVSR
IAAAMVRGFQ GKDPSDPQRI MASVKHFALY GAVEGGRDYN VVDMSPLRMY QDYLPPYRAA
IDAGAGGVMV ALNAVNGVPA SANKWLLDDL LRRQWGFKGV VLSDHGAITE LLRHGVAADG
REAARLAISA GVGMSMADTL YDQELPALVR SGAVAQSVLD EAVTHVLNTK YDLGLFHDPF
RRIGRAEDDP ADVNAESRLH RADARAMARD SLVLLENRGD TLPLRKNATV ALIGPLADSQ
VDMLGSWSAV GVAEQAVTLR QGMEAALAGQ GKLLHAVGAN ITDDARVIDY LNQLNWDRPE
VVPDKRTPQA MLDEAVALAA QADVIVAAVG EARGMSHESS SRTRLDLPDS QQALLRALKA
TGKPLVLVLM NGRPLALGWE KDNADAILET WYSGIEGGHA IADVLFGEHN PSGKLPISFP
RSVGQIPTYY NHLRLGRPYT PGTPGNYTSQ YFEEATGPLY PFGYGLSYSD FQLSAPKLSA
ERMHPDQRIR VSVTLKNAGP RPGATVVQLY LHDEAASVIR PEKELKAFRR VKLEAGEARE
LSFEIDESML RFFDASLQHV SEPGAFRVQL GLDSQAVQEA RFELLPRP
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