| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3233 |
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| Symbol | |
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| ID | 5106740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3579143 |
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| End bp | 3581029 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504490 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001188718 |
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| Protein GI | 146308253 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.889019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCTG CCGTCGCGCG CTACAAACAA CTGCTATCCG GCGCCCTCGC CCGCTATTTC
CCCCGCACCA CCGCCTACCT GCGCGCCGAG CGCGAAGCCG CGCAGCCACG CAAACCCGCG
CGCAAGCAGA GCAAGAAGAA GGCCAGCGGC AGCAGGAAGA CCGGCAGCCG CAAGGACGCC
GGCGGCAAAC CCGGCCCCGC CGGTATCTAC CCCGCAACCC GGCTGAAGGT CGAAGACGCC
CAGGTGCAGG CCATGCGCGA GCGCGTGGCC CAGGCGGTGA GCGCCGGACT GATCGGTGCG
CCGTCGGACG AGCAGTGGGC GATGATTCTC TGCCGCGCCC CGCTGGCGCG CATCTTCGCC
GGCGCCGGCT CGGGCAAGTC GAGCACCCTG GTGCTGCGCG TGGTGTTCCT GCTCTGCCAC
CAGGAAGTCG ACCCCAAGCG CCTGACGGTG ATCTCCTTCA CCAACGCCTC CTGCGCCGAG
TTGCGCGAGC GCCTGCAGCG CCTGCTGGGC TTCTGGCACT ACCCGCACGA TGCGCGCCAG
TGCGTGCGCA CCTTCCACGC CGCCATGGCC ACGCTGGCCA AGGAGGACCT GGGCAACCCG
CGCTGGTTCG AGCAGCTGGA CGACCCCGCA GAAGAACCGG ACAACCCGCT CACCGGCGCT
CGCCTGCGCC GGGCGCAGCA GCGCCTGCTC AGGCAGGCCT ACCAGAACGC CTACGCCGAG
GACGCGCGCT TTCGCGTCCT GACCCACCGC CTGCTCAAAC TGCCGGCTCC CGAGGAGCCG
CCACAGGGCA AGGCCAAGGC GCCGCTGGAT GCCTGCAAGC TGCCCGGCGA ATTCGCCGCC
CTGCCCTTGT TCGAGCTGCT GCATGGGCAG ATCGATTTTG CTGAAAGCCT CGGCATTCGC
CTCGACCGTC TGGACCTGAA GACGCTGGCC TGCGGCCCAC GCGAGCGCGA TTTCATCGAG
GCCATGCAGC GCTTCCACCA GCATTTCAGC GCCCTGCTGC ACAGCCAGGG GCTGATCAGT
TTCAACGGCG CCTTCGCGCA GTTGAGCGAG CGCCTGCAAG GCGCCGGCGA CAAACCCGGC
CCGGCCCTGC TCGCCCTGAG CCACCTGCTG ATCGACGAAT TCCAGGACAT CTCGCCGCAG
ATCGTGCTGT GGCTGCAGGC CGTGCACCGC CGGCTGCACC AGGCAGGCGA GCGCATCAGC
CTGATGGCCA TCGGCGACGA CTGGCAATCG ATCTACGGCT GGCGTGGCAG CTCGCCGGAG
CTGTTCATCG ACTTCGACCG GCACTTCCCC AGCCGCGGAC GCGGCAAGAG CACCACCCTG
CTGCTGAACA CCAACTACCG CAGCATCGAA CCGGTGATCC GCGATGGCGA GAAGGTGCTG
GCCGAGGTCC AGAACAAGCA GGCCAAGACC TGCGTCGCGG CCCGGGCGAT GCAGCCGGGC
GATCATGGCG TCAGGCTGAT CCAGCGCTTC GACCTGGCCA GCGGCCTGCC GCGGCTGCTC
GAAGAGATTC GCGCGCAATG CGCCCATGTC GCCAGCCGCC CCGGCGCCGA CCGCACCGCC
GTGCTGCTGC TCAGCCGGCG CAACGAGCCC CTGCAGCAGG TACGCGCGCA GCTGGACAAG
GCGCTGCCGG TCAAGGCCCT GACCATCCAC CGCGCCAAGG GCCTGCAGGC CGAGGTGGCG
ATCATCCTCG ACGACTGCCT GCCGGTGGAG AAGCATCCGC TACGCAACGC GCTCTACGCC
CAGTGCGGCT TCTTCGCCGG CAGCTACGAC CAGGCCATGC AGGACGAAAC CCGGCGCCTG
GCCTATGTGG CCATCACCCG CGGTGTGAGC CGGGTGCTGT GGTACACGCG CAAGGCCCAG
GGCGCGACCC AATGCCTGGC CCGCTAG
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| Protein sequence | MLSAVARYKQ LLSGALARYF PRTTAYLRAE REAAQPRKPA RKQSKKKASG SRKTGSRKDA
GGKPGPAGIY PATRLKVEDA QVQAMRERVA QAVSAGLIGA PSDEQWAMIL CRAPLARIFA
GAGSGKSSTL VLRVVFLLCH QEVDPKRLTV ISFTNASCAE LRERLQRLLG FWHYPHDARQ
CVRTFHAAMA TLAKEDLGNP RWFEQLDDPA EEPDNPLTGA RLRRAQQRLL RQAYQNAYAE
DARFRVLTHR LLKLPAPEEP PQGKAKAPLD ACKLPGEFAA LPLFELLHGQ IDFAESLGIR
LDRLDLKTLA CGPRERDFIE AMQRFHQHFS ALLHSQGLIS FNGAFAQLSE RLQGAGDKPG
PALLALSHLL IDEFQDISPQ IVLWLQAVHR RLHQAGERIS LMAIGDDWQS IYGWRGSSPE
LFIDFDRHFP SRGRGKSTTL LLNTNYRSIE PVIRDGEKVL AEVQNKQAKT CVAARAMQPG
DHGVRLIQRF DLASGLPRLL EEIRAQCAHV ASRPGADRTA VLLLSRRNEP LQQVRAQLDK
ALPVKALTIH RAKGLQAEVA IILDDCLPVE KHPLRNALYA QCGFFAGSYD QAMQDETRRL
AYVAITRGVS RVLWYTRKAQ GATQCLAR
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