| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3225 |
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| Symbol | |
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| ID | 5106732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3568277 |
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| End bp | 3569167 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640504482 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001188710 |
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| Protein GI | 146308245 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC ACCGCGAAAT GCAGGTGTTC CTCGCCGTGG CACAGGCGCG CAGCCTGGCG
GCGGCTGCCA GGACGCTGCA GCTGTCGCAG GCCACGGTGA TGCGCACCGT CGCCAGCCTG
GAGCAGCGTC TGGACTGCAT CCTGCTGCTG CGCGGGCCTC GCGGCGTGAG CTTGAGCCCG
GCTGGCGTGC GTTTCGCCGA CAGCTGTCAG CGCATCCTGC AGCGGCTGGA CGAGGCCGAG
CAGTCGGTGA CGGGGCTGCA TGCCAGCCCG GCCGGGCAGT TGACCCTGGC CCTGCCGCTG
TTGATGACGC ATCAGGTGCT GGCGCCCATC GCCGTTGATT ACCTGGCGGC CTTTCCCGAG
GTGAGCCTGG CTACCCTGGC GCGCGAGGAG CTGCCGAGGC TGCTGGAGGA GGGCATCGAC
CTGGCGCTGG TAGTCGGCCA CATGCCCAGT TCGTCCGGTT TCGCCGTACC GCTGGGGCAG
GTGCGCCCGC TGATCTGTGC GGCACCGGCC TATCTGCAGC GCTGGGGCCG ACCGGCCAGG
CCGGACGCCT TGGCGGCGCA CCGCACCATC GCCTCCTCCT CGACCGGCCA TGCCGGGGAA
TGGCGCTTTG CCGACAGGGT GGTGAAGCTT GCGCCACAGC TGACCTGTAG CACGCCACAG
GCGTCCATTC GCGCGGCGCT CGCCGGCTTC GGGCTGACCC GCTGCCTGAG TTACGAAGCC
CATCATGAGT TGCAGGCGGG GCAGTTGCTG GCCGTGCTCG AGGATTTCGC CGCGCCGCCC
TTGCCGGTGC AGCTGTATTA CCGCGAAGGG CGCCGGGCGG CCGCGCGGGT ACGCAGCTTC
CTTGACTTTG CCGTGCCGCG GCTGCGCGCC CACCCGGCCT TTCAGGCCTG A
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| Protein sequence | MSQHREMQVF LAVAQARSLA AAARTLQLSQ ATVMRTVASL EQRLDCILLL RGPRGVSLSP
AGVRFADSCQ RILQRLDEAE QSVTGLHASP AGQLTLALPL LMTHQVLAPI AVDYLAAFPE
VSLATLAREE LPRLLEEGID LALVVGHMPS SSGFAVPLGQ VRPLICAAPA YLQRWGRPAR
PDALAAHRTI ASSSTGHAGE WRFADRVVKL APQLTCSTPQ ASIRAALAGF GLTRCLSYEA
HHELQAGQLL AVLEDFAAPP LPVQLYYREG RRAAARVRSF LDFAVPRLRA HPAFQA
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