Gene Pmen_3224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3224 
Symbol 
ID5106731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3567514 
End bp3568140 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID640504481 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001188709 
Protein GI146308244 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.395203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTC CCGCCATCAA GCTGTACAAC TTTCCTCGCT CCGGCCATGC CCACCGCGCC 
GAGCTGATGC TGTCGCTGCT GCAGCTGCCC ACCGAGCTGA TCTTCGTCGA TCTGGCCAAG
GGCGCGCACA AGACGCCTGA GTTCCTCGCC CTCAACCCCT TCGGCCAGGT GCCGGTGATC
GATGACGGCG GCACTGTCGT CGCCGACTCC AACGCCATCC TCGTCTACCT GGCCAAGCGC
TACGGCAATG ACGACTGGCT GCCGCAGGAG CCGGCCGCTG CCGCCCGTGT GCAGCGCTGG
TTGTCCGTGG CGGCCGGTCC GGTGGCCTTC GGCCCTGCCG CCGCGCGCCT GGTTACCGTA
TTCGGCTACT CGTTCAACAC CGAAGAAGTG ATCAACCGCG CCCATGCGCT GTTCACCGTG
ATGGAGGGCG AGCTGAGCGA AACCCCCTTC CTGACCGGCG ACAAGCCGAG CATCGCCGAC
GTCGCCAACT ACTCGTACAT CGCCCATGCG CCGGAGGGCA ACGTGTCGCT GGAGCCCTAT
CCGAACATCC GCGCCTGGCT GGCTCGCATC GAGGCGCTGC CGGGTTTCGT GCCGATGCCG
CGTACCGCCG CCGGTCTGCA GGCCTGA
 
Protein sequence
MSRPAIKLYN FPRSGHAHRA ELMLSLLQLP TELIFVDLAK GAHKTPEFLA LNPFGQVPVI 
DDGGTVVADS NAILVYLAKR YGNDDWLPQE PAAAARVQRW LSVAAGPVAF GPAAARLVTV
FGYSFNTEEV INRAHALFTV MEGELSETPF LTGDKPSIAD VANYSYIAHA PEGNVSLEPY
PNIRAWLARI EALPGFVPMP RTAAGLQA