| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3219 |
|---|
| Symbol | |
|---|
| ID | 5106548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 3561592 |
|---|
| End bp | 3562035 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640504476 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001188704 |
|---|
| Protein GI | 146308239 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.199693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.39103 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATGA AGATCGGCGA ACTGGCGCAG CGCACGGGCC TTGCGGCCTC GCGCATCCGT
TTCTACGAGA GCATCGGTCT GCTCAAGCTG GTGCAGCGTC AGGCCAATGG TTATCGCAGC
TATCCGGAGG AAGCGGTGCT GGTGCTCAAC CTGATCACCG CCGCGCAGCA GGCCGGTTTC
AGCCTGGACG AACTGCGCAC GCTGCTGCCG CAGGACCTGA CGCAATGGCA GCACGGCAAG
CTGCTCGATA CCCTGCATGC CAAGGTGCGC GACATCGAGG CGCTGGAGCA GCGCCTGGCG
CAGAGCAAGG GCCACCTGCT GGCGCTGATC GACGAGATCG AGAGCAAACC GGACGACCTC
GACTGCGCCG CCAACGCCAA GCGGGTGTTG TCGAAGATGA ACCTGGGCGA GACGAGCGAG
GCGCCCAGAC GCGCGAAGAA ATAA
|
|---|
| Protein sequence | MVMKIGELAQ RTGLAASRIR FYESIGLLKL VQRQANGYRS YPEEAVLVLN LITAAQQAGF
SLDELRTLLP QDLTQWQHGK LLDTLHAKVR DIEALEQRLA QSKGHLLALI DEIESKPDDL
DCAANAKRVL SKMNLGETSE APRRAKK
|
|---|
| |