Gene Pmen_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3162 
Symbol 
ID5106491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3502644 
End bp3503084 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content62% 
IMG OID640504418 
Producthypothetical protein 
Protein accessionYP_001188647 
Protein GI146308182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.867755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0805493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCC AACTCATCCT CAGCTTCGCT TTCTCCGTAC TGGCAGCCAA CGTGTTCGCC 
GCCTCTTCCG CCCAACCTGT AGTCGCCGAA GGTGGCTCCG ATCGCCTGAT CGAGAACCGC
GTCGCCGAAG GTGGCTCCGA TCGTCTGATC GAGAACCGCG TCGCCGAAGG TGGCTCCGAT
CGTCTGATCG AAAACCGCGT CGCCGAAGGT GGCTCCGATC GCCTGATCGA GAACCGCGTC
GCCGAAGGTG GCTCGGATCG TCTGATCGAA AACCGCGTCG CCGAAGGTGG CTCGGATCGT
CTGATCGAGA ACCGCGTTGT CGAAGGTGGC TCTGACCGTC TGATCGAAAA CCGCGTCGCC
GAAGGTGGCT CGGATCGTCT GATCGAGAAC CGCGTTGCCG AAGGTGGTTC CGACCGTCTG
ATCGAAAACC GCACCGCCTG A
 
Protein sequence
MKRQLILSFA FSVLAANVFA ASSAQPVVAE GGSDRLIENR VAEGGSDRLI ENRVAEGGSD 
RLIENRVAEG GSDRLIENRV AEGGSDRLIE NRVAEGGSDR LIENRVVEGG SDRLIENRVA
EGGSDRLIEN RVAEGGSDRL IENRTA