| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3159 |
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| Symbol | |
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| ID | 5106488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3499859 |
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| End bp | 3500758 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504415 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001188644 |
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| Protein GI | 146308179 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.789389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0875309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGC GCCGACTCCC TCCGCTTTCC GCCTTGCGCG CCTTCGAGGC GGCGGCACGC
CACGAAAGCG CCAAGCAGGC CGCGGAAGAA CTTTCCGTTA CCGCCACAGC GATCAGTCAC
CAGATTCGCG CACTGGAAGA ATCCCTCGGT GTCGCGCTGT TCGTGCGCAA GCCGCGTCAG
CTGGAACTGA CCATGGCCGG ACGTGAACTG CAGCAGGTGC TGGAAAGCGC CTTCGACAGC
ATCGGCGCCG CGGTCGAACG CCTCAGCGCG ACACCCAGCC GACAGGCCAT CACCCTCAGC
ACCACGCCGG CAGTGGCCGT GCGCTGGTTG CTGTCCTGGG TATGCCTGCT GCGCGACGCG
CACCCGGAGA TCGATCTGCG CATCCATGCC TCGCACGAGC CGGTGGCACT CGATGGCGTC
ACCGCCGATA TCGCCATTCG CTACGGCGAC GGCCGCTGGC CCGGTCTGGT GGCCGAGAAG
CTGTTCGACA ACACCTTTAT CCCGGCCTGC AGCCCTTTGC TGGGGCTGCA CGACGCGGCC
GATCTGCCCG GGCATTCGCT GATTCACTTC CGTAACCAGG CTGCGATTTC CTCGCCGCTG
GACTGGGCCG TCTGGCAGAA AAAAGCGCAG GTGCCGGGGC TGGATGTCAG CGCCGGGCTG
GTGTTCTCCG ACGAGACCCA CGCCGTCTCG GCTGCCGTCG GTGCCCAGGG TGTGGCGCTG
ATGAGCCGCC AGTTGATCGA GGACGAACTG CGCGAGGGGC GCCTGGTACA GCCCTTCGGC
CCGGAGCTGG AAGGCAAGCC GTTCTTTCTG GTGTACCCGG AGAACCGCCG GAACGATCCG
ACCATTCTGG CGGTGCGGGA GTGGATCCTG ACGGTGCCGG GTGGGTTGTG TTCGGTGTAG
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| Protein sequence | MSRRRLPPLS ALRAFEAAAR HESAKQAAEE LSVTATAISH QIRALEESLG VALFVRKPRQ
LELTMAGREL QQVLESAFDS IGAAVERLSA TPSRQAITLS TTPAVAVRWL LSWVCLLRDA
HPEIDLRIHA SHEPVALDGV TADIAIRYGD GRWPGLVAEK LFDNTFIPAC SPLLGLHDAA
DLPGHSLIHF RNQAAISSPL DWAVWQKKAQ VPGLDVSAGL VFSDETHAVS AAVGAQGVAL
MSRQLIEDEL REGRLVQPFG PELEGKPFFL VYPENRRNDP TILAVREWIL TVPGGLCSV
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