| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3153 |
|---|
| Symbol | |
|---|
| ID | 5106482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 3494009 |
|---|
| End bp | 3495322 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640504409 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001188638 |
|---|
| Protein GI | 146308173 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.11854 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGATT CTTTTAGAAA CCAGCTTTCC TCCATAAAGA AAGCCATAGA AAAAGAAAAA
ACCGTCACAC TCAAGCTGCC AACAATTTTT GCCTTCAAAG ATCAAGGTAT ATACGATTTT
GAAAAGTCCT TATCTTTCTT TGACTGGTCT ATCAAGGACC GCCCCGTAAA GATAGATTTA
ACTGAATGCA AATCAGCCAA CTATCAAACC CTATCCCTCT TAGTTCTATA TGCATGGACA
CTAGTAGAAC AAAACTGCAC AGTCTCTTTT ATAGAAGCAG AAGGCGATAA CGGCGCTAGC
TCAATGTGGC GTCGTATGGG GGCAAGAGGA TTTATGCCCA TCTTACTGCA AGATGGACAT
AATTTTAACG GAGCCCCATC TAAACCTCTC CTAAAAATCA AGAGCACTGC AGATTTCAAA
ACCGCCATCA GCACAGCTGA ATCTTATACA AAAGACTTTA ACGTAGAGTT CGGGAAAACG
CTCAGATACG TGCTAAGCGA ACTCCTATAC AACACTCTCG AACATGGAAA AAACATAAAG
AGCGTGCGCG GTAAAAATAT ACGAATACCC TCAATAGCTC AATTCACTTG GTACCAAACT
CACAATGAAA TTCATTTCAT AATCGCAGAT TGCGGAGTTG GAATAAAAAA ACATATAGAG
CAAACATACC CAGGACAAGA GTCGCACGAA GAGGCAATAC GACTAGCAAT AAAGCCGCAA
GTTTCCGGAA CCTTCGCTCT AAACGATCCA TATACGCAAA AAAACAATGC CGGCATAGGC
CTCTTTATAT CATCAAACAT AATCAGGCGA CTAAATGCTG AAATGCATAT CCTTTCAGGT
GACGGACTGC TGCACATCTC CCCTAGAGAT GTAACAGCAA AAACACTCCA TCAATCTTGG
CCAGGCACCA TCGTCCTTGT AACTCTTAGG CTGGAAAAAA CATCAAACCT TAACCTTCAC
GAGATGATGC GTGAATTTCG AGACTCTGCC TTTAAAGAAC AAAAACTAGC AGATACGGAT
GAGGAAAATG GCAAGCTGTA CTTAAGTATC TATAATTACT TCGGGCAATA TGCCGAAGAC
AAAGAGGCCG CAATAAAATT CAGGGATAAA CGAATAACTC CGGCCATAGA TAGCGGCAAA
AAAATCGTCC TAGACTTTGA CAATGTAATA AGTGCTCCAC ATAGCTTCCT AAGCGCACTT
ATAGCTTCGC CAACAAAGCG CCTCGGAATG ACCACATATA AAATCATCAA AATAACCAAT
GCAACAGCAG AAATCAGAGA GACAATTGAC TTCATTTTTG ATGAAAACAC ATAA
|
|---|
| Protein sequence | MHDSFRNQLS SIKKAIEKEK TVTLKLPTIF AFKDQGIYDF EKSLSFFDWS IKDRPVKIDL
TECKSANYQT LSLLVLYAWT LVEQNCTVSF IEAEGDNGAS SMWRRMGARG FMPILLQDGH
NFNGAPSKPL LKIKSTADFK TAISTAESYT KDFNVEFGKT LRYVLSELLY NTLEHGKNIK
SVRGKNIRIP SIAQFTWYQT HNEIHFIIAD CGVGIKKHIE QTYPGQESHE EAIRLAIKPQ
VSGTFALNDP YTQKNNAGIG LFISSNIIRR LNAEMHILSG DGLLHISPRD VTAKTLHQSW
PGTIVLVTLR LEKTSNLNLH EMMREFRDSA FKEQKLADTD EENGKLYLSI YNYFGQYAED
KEAAIKFRDK RITPAIDSGK KIVLDFDNVI SAPHSFLSAL IASPTKRLGM TTYKIIKITN
ATAEIRETID FIFDENT
|
|---|
| |