| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3137 |
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| Symbol | lamB |
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| ID | 5107459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3471482 |
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| End bp | 3472753 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504393 |
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| Product | maltoporin |
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| Protein accession | YP_001188622 |
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| Protein GI | 146308157 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0559098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0102829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCA TGCAACCCGC CCAGCTGCTG CGTCCCAGCG CCCTGCTCGT CGCCATGCTG
CTGGCCACCC CGGCCCTGGC CGTGGACTTC CACGGCTATC TGCGCTCCGG CATCGGTGCC
ACCGCCGGTG GCGGCGACCA GGCCTGCTTC CAGGCTGCCG GCGCGCCGGC CAAGTACCGT
CTCGGCAACG AGTGCGAGAC CTACGCCGAG ATCGGTCTCG GCCACGAGGT GTGGAAGGAA
GGCGAGCAAA GCTTCTATAT CGACAGCATG ATCGCCTACA AATCGGACCA GGCTAACGAC
TGGGAGGCCA CCGACGGCGA CAGCAACCCG TACGCCAACG GCACCAGCTC GATCCGCCAG
TTCAACGTGC AGGCCAAGAA CTTCCTGCCG GCCCTGCCCG GCGCCGCCCT GTGGGCCGGC
AAGCGCTACT ACAAGCGCAA CGACGTGCAC ATCAACGACT ACTACTACTG GGACGTTTCC
GGCCCCGGCG CCGGCATCGA GGACATCGAC CTGGGCTTCG CCAAGGCGCA CGTGGCCTGG
ATGCGCAACA CCGATGGCGA CTGGGTCTAT GAAGGCACCG GCACCGGCAC CAACGTGGCC
AACGACACCC TCGACCTGCG CCTGACCGAC ATCGACTTCA ACACCGACGG CAAACTGGAG
CTCGGCTACG ACTACGGCAA GGCCAACCTC ACCGAACAGC AGAAGGATGA CCCCGGCTAC
ACCAACCAGA AGGGTCATCT GGTCACCGTG CAGCACATCC AGGGCAACTG GTTCGGCGGC
TTCAACAAGC TCGCCCTGCA GTACGGCACC GACGGCATCA TCGGCAGCAC CGGGCGCAAC
AGCACCGGCA ACAGCGACGG CAAGATGTTC CGCCTGGTCA ACCAGGGCGT GGTCGGCCTC
TCCGACGACA TTGAGATGAT GTACGTGCAG ATCTACGAGG ATAAGGACTT CGACAACGAC
TCCGGGCAGA CCTGGACCTC GTTCGGCGTG CGCCCGGTGT ACAAGTGGAC CAACACCATG
AGCACCGCGC TGGAGTTCGG CTACGACCAT ATCGACCCGC AGGCCAAGGG CGAGAAGTCC
CGCGACCTGA AGAAAGTCAC CCTGGCCCAG CAGTGGTCGG CCGGCCGCAG CTTCTGGGCG
CGTCCGCAGA TCCGTGTGTT CGCCACCTAC GCCATGTGGG ACGGCGGCAA GTACAACGCC
GCCAGCGAAT CCATCGATGC CGGCGACGAC AACGGCCTCA CCTTTGGCGT CCAGGCCGAA
GCCTGGTGGT AA
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| Protein sequence | MNTMQPAQLL RPSALLVAML LATPALAVDF HGYLRSGIGA TAGGGDQACF QAAGAPAKYR
LGNECETYAE IGLGHEVWKE GEQSFYIDSM IAYKSDQAND WEATDGDSNP YANGTSSIRQ
FNVQAKNFLP ALPGAALWAG KRYYKRNDVH INDYYYWDVS GPGAGIEDID LGFAKAHVAW
MRNTDGDWVY EGTGTGTNVA NDTLDLRLTD IDFNTDGKLE LGYDYGKANL TEQQKDDPGY
TNQKGHLVTV QHIQGNWFGG FNKLALQYGT DGIIGSTGRN STGNSDGKMF RLVNQGVVGL
SDDIEMMYVQ IYEDKDFDND SGQTWTSFGV RPVYKWTNTM STALEFGYDH IDPQAKGEKS
RDLKKVTLAQ QWSAGRSFWA RPQIRVFATY AMWDGGKYNA ASESIDAGDD NGLTFGVQAE
AWW
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