| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3136 |
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| Symbol | |
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| ID | 5107458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3469445 |
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| End bp | 3471112 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504392 |
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| Product | glucan 1,4-alpha-maltotetraohydrolase |
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| Protein accession | YP_001188621 |
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| Protein GI | 146308156 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.815174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00720592 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCGAT ACCTGCGACT GGCCGCGCTG ACCCTGGCCC TGGCGCCGCT GGCCTACCCC
TGGGGCAATC TGGTGCGTGC CGCCGACGCG CCAGGCAAGA CCGCCAGCGG CGTGCGCTAC
CACGGCGGCG ACGAGATCAT CCTCCAGGGC TTTCACTGGA ATACCGTGCG GACCTCGAGC
AACTGGTACG CGACGTTGGC CAGCATGGCG CCGACCCTGG CCGCCGACGG CTTCAGTGCG
ATCTGGATGC CGGTGCCCTG GCGCGATTTC TCCAGCTGGA GCGACCCCGG CAATGGCACC
TCGGGCGGTG GCGAAGGCTA CTTCTGGCAC GACTTCAACA AGAACGGCCG CTATGGCAGC
GACAGCCTGC TCAGACAGGC CGCCAGCGCG CTCAATGCGG CCGGGGTCAA ACCCATCTAC
GACGTGGTGC CCAACCACAT GAACCGCGGC TACCCGGACA AGGAAATCAA CCTGCCGGCC
GGCCAGGGGC TGTGGCGCCA CGACTGCAAT GACCCGGGCA ACTACGCCAA CGACTGCGAC
GACGGCGACC GCTTCATGGG CGGCGACGCC GACCTCAATA CCGGCCACCC GCAGAACTAC
GCGATGTTCC GCGACGAGTT CGCCAGGCTG CGCAGCCAGT ATGGCGCCGG GGGCTTTCGC
TTCGACTTCG TCCGCGGTTA CGCCGGCGAG CGGGTCGCCA GCTGGATGAG CGATGCCCAC
GACAACGGCT TCTGCCTCGG CGAGCTGTGG AAGGCGCCGG GCGAGTACCC GAGCTGGGAC
TGGCGCAACG GCGCCAGCTG GCAGCAGATC CTCAAGGACT GGTCCGATCG CGCCAAGTGC
ACGGTGTTCG ACTTCGCCCT CAAGGAGCGC ATGCAGAACG GCGGCATCGC CGACTGGCGC
CACGGCCTCA ACGGCAACCC CGATGCGCGC TGGCGCGAGG TGGCGGTGAC CTTCGTCGAC
AACCACGACA CCGGCTATTC GCCTGGCCCG CACGGCGGCC AGCACCACTG GCCGCTGCCG
GATGCGCGGC TCAAGCAGGC CTATGCCTAC ATCCTCAGCA GCCCGGGTAC GCCGGTGGTG
TACTGGCCGC ACATGTACGA CTGGGGCCAT GGCGACTTCA TCCGCCAGCT GATCCAGATC
CGCCGCGCGG CGGGGGTCAA GGCGGCCTCG GCGATCCAGT TCCACACGGG GTTCTCCGGC
CTGGTGGCGA CCATCAGCGG CAGCCAGCAG CAACTGCTGA TCGCCCTGGA CTCCAACCTG
TCCTCGCCCG GCCAGGTGGC CAGCGGCGAC TTCACCCAGG CGCTCAATAC CGATAACGGC
GCGATCCGTA TCTGGCGCAG CGGTCAGGGC GGCGGGGATG GGCAGGGCAA CCTGGTCAGC
GTCAACTTCC GTTGCGACAA CGGCGTGACC CAGTGGGGCG ACAGCGTCTA TGCGCTGGGC
AACGTCACCC AGCTGGGCAA CTGGAGCCCG GCCGGCGCCG TGCGCCTGAC CGACACCAGC
GCCTACCCGA CCTGGAAAGG CAGCATCGCC TTGCCGGCCG GCCAGCAGGT GCAGTGGAAG
TGCATCGTGC GCAGCGAAAG CAACCCGACC CAGGTCAAGA CCTGGCAGCC GGGCGGCAAC
AACAGCGTGA CGGTGGCGTC AGGGGCCAGC ACGGCGGGGA GTTTCTAA
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| Protein sequence | MNRYLRLAAL TLALAPLAYP WGNLVRAADA PGKTASGVRY HGGDEIILQG FHWNTVRTSS
NWYATLASMA PTLAADGFSA IWMPVPWRDF SSWSDPGNGT SGGGEGYFWH DFNKNGRYGS
DSLLRQAASA LNAAGVKPIY DVVPNHMNRG YPDKEINLPA GQGLWRHDCN DPGNYANDCD
DGDRFMGGDA DLNTGHPQNY AMFRDEFARL RSQYGAGGFR FDFVRGYAGE RVASWMSDAH
DNGFCLGELW KAPGEYPSWD WRNGASWQQI LKDWSDRAKC TVFDFALKER MQNGGIADWR
HGLNGNPDAR WREVAVTFVD NHDTGYSPGP HGGQHHWPLP DARLKQAYAY ILSSPGTPVV
YWPHMYDWGH GDFIRQLIQI RRAAGVKAAS AIQFHTGFSG LVATISGSQQ QLLIALDSNL
SSPGQVASGD FTQALNTDNG AIRIWRSGQG GGDGQGNLVS VNFRCDNGVT QWGDSVYALG
NVTQLGNWSP AGAVRLTDTS AYPTWKGSIA LPAGQQVQWK CIVRSESNPT QVKTWQPGGN
NSVTVASGAS TAGSF
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