Gene Pmen_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3105 
Symbol 
ID5107428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3432421 
End bp3432834 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content65% 
IMG OID640504362 
Producthypothetical protein 
Protein accessionYP_001188591 
Protein GI146308126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.264857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGGG CCATGAATTC ACCGCTTCCC CTACGCAATC CCTGCCCGCC GGGCGCCTGC 
GACTGTCAGC GTGACGAGCT GCTGGAGCGG CCTGGCGCCG ATCTGCGCGT GCTGCTGCTG
ACCCGCCACG AGGAGCAGCG CCTGCTCGAT CGCCTGGAGA GTCTGCAAAG CCTGGAAGAC
CTCGAGCGCA TGCAGCAGCG CATGTTCGAG CAACTGGGCA TCCGCCTGCA CATCGAGCCG
AGCCATGGCG AGGTACGCAG CATGCGCGGC ATTCATATGC ACTTCGACAC CCACCCGGGG
CTGTGCCGCA AGACCCGGCA GAGCATTCCG GCGGCGATTC GCCGGGCCAT GGAGAAGAAG
CCGGAAATCG CCTGGCGCCT GCTCGATTCC TTCGACCTGT TTGGCGGTCT GTGA
 
Protein sequence
MIRAMNSPLP LRNPCPPGAC DCQRDELLER PGADLRVLLL TRHEEQRLLD RLESLQSLED 
LERMQQRMFE QLGIRLHIEP SHGEVRSMRG IHMHFDTHPG LCRKTRQSIP AAIRRAMEKK
PEIAWRLLDS FDLFGGL