Gene Pmen_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3102 
Symbol 
ID5107425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3430619 
End bp3431164 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content68% 
IMG OID640504359 
Producthypothetical protein 
Protein accessionYP_001188588 
Protein GI146308123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.184015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGC GCTCGCTGCA CCTGCTTTCG GCCCTGCTGC TGTCGCTGGC GCTGGCTACC 
ACTTCGGTAC ATGCCAGCAC CCAGAGCGGC TGGCGCGAAC GGCTGCCGCA GGCAAGCCTG
ATCGGCAGCG GCGACTTCAG CTGGTTCGGC TTCTCGGTCT ACAACGCCAA GCTGTGGAGC
CCCTCCGCCA AGGTGGATTT CGACCAACCC TTCGCCCTGG AGCTGACCTA TCGGCGCAAC
ATCAGCCGCG ACACGCTGGT GGACACCAGC CTCGACGAGA TCCGCCGCAT CGACGCCCAG
GCCCTGCAGG CGGGGCGCGA GGCCGAGTGG GCGCGGCAGA TGCGTCAGGC CTTCGTCGAC
GTACAGGACG GCACCCGCAT CACCGGCGTC TATCTGCCTG GCGAGGGCTG CCGCTTCTAT
GTCGACGGTC AGCTGCAGCA CGTGGTCGAC GACCCCGAGT TCGCCCGCGC CTTCTTCTCC
ATCTGGCTCG ATCCGCAGAC CCGCAGCCCG AAACTGCGCG CGGCGCTGCT CGGCCTCAAC
CGTTGA
 
Protein sequence
MAERSLHLLS ALLLSLALAT TSVHASTQSG WRERLPQASL IGSGDFSWFG FSVYNAKLWS 
PSAKVDFDQP FALELTYRRN ISRDTLVDTS LDEIRRIDAQ ALQAGREAEW ARQMRQAFVD
VQDGTRITGV YLPGEGCRFY VDGQLQHVVD DPEFARAFFS IWLDPQTRSP KLRAALLGLN
R