Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3102 |
Symbol | |
ID | 5107425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3430619 |
End bp | 3431164 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640504359 |
Product | hypothetical protein |
Protein accession | YP_001188588 |
Protein GI | 146308123 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.184015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGC GCTCGCTGCA CCTGCTTTCG GCCCTGCTGC TGTCGCTGGC GCTGGCTACC ACTTCGGTAC ATGCCAGCAC CCAGAGCGGC TGGCGCGAAC GGCTGCCGCA GGCAAGCCTG ATCGGCAGCG GCGACTTCAG CTGGTTCGGC TTCTCGGTCT ACAACGCCAA GCTGTGGAGC CCCTCCGCCA AGGTGGATTT CGACCAACCC TTCGCCCTGG AGCTGACCTA TCGGCGCAAC ATCAGCCGCG ACACGCTGGT GGACACCAGC CTCGACGAGA TCCGCCGCAT CGACGCCCAG GCCCTGCAGG CGGGGCGCGA GGCCGAGTGG GCGCGGCAGA TGCGTCAGGC CTTCGTCGAC GTACAGGACG GCACCCGCAT CACCGGCGTC TATCTGCCTG GCGAGGGCTG CCGCTTCTAT GTCGACGGTC AGCTGCAGCA CGTGGTCGAC GACCCCGAGT TCGCCCGCGC CTTCTTCTCC ATCTGGCTCG ATCCGCAGAC CCGCAGCCCG AAACTGCGCG CGGCGCTGCT CGGCCTCAAC CGTTGA
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Protein sequence | MAERSLHLLS ALLLSLALAT TSVHASTQSG WRERLPQASL IGSGDFSWFG FSVYNAKLWS PSAKVDFDQP FALELTYRRN ISRDTLVDTS LDEIRRIDAQ ALQAGREAEW ARQMRQAFVD VQDGTRITGV YLPGEGCRFY VDGQLQHVVD DPEFARAFFS IWLDPQTRSP KLRAALLGLN R
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