Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3073 |
Symbol | |
ID | 5107396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3399811 |
End bp | 3400734 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640504330 |
Product | ABC transporter related |
Protein accession | YP_001188559 |
Protein GI | 146308094 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATA TAAGAAACCT GACCAAGCGT TTTGCGCAGC ACACGGCAGT CGATGACCTG TCGTTCCAGG TCCAGCCAGG GGAAGTGCTG GGCTTTCTCG GCCCCAACGG GGCCGGCAAA TCCACCACCA TGAAGATGCT CACCGGCTTT CTCGCGCCGA CCTCCGGCAC GGCGAGCATC CTCGGTTGCG ATATCCAGAC CCAGACCCTC GAAGCCCAGC GGCAGATCGG TTATCTGCCG GAAGGCGCGC CTTGCTATGG CGATATGACG GTGCGCGGCT TTCTCGACTT TATCGCCGAG GTACGCGGTT TTCGCGGTAG CGAGAAGAAG CAGCGCGTGC AGCGCGCGGT GGAGCAGGTG GAGCTGGAAA AGGTGCTGGA GCAGAGCATC GAGACGCTCT CCAAGGGCTT CAAGCGCCGC GTCGGCCTGG CCCAGGCGAT CCTGCATGAT CCGCGCGTGC TGATCCTCGA TGAGCCCACC GACGGTCTCG ACCCGAACCA GAAGCACCAG GTGCGCCAGC TCATTCAGGG CCTGGCGCGC GACAAGATCG TGATCATTTC CACCCACATC CTCGAAGAGG TCACGGCGCT GTGCACCCGC GCGGTGGTGA TCGCCCAGGG CCGCCTGCTG GCCGACGGCA CGCCGCTGGA GTTGGAAAGC CGCTCGCGCT ATCACCAGGC GGTGACGCTG GTGGCCGATG AGGCGCTGGA CCAGGCTGCC CTGGCGACGC TGCCGGGTGT CGCCGGTGTC GAGGAGAACG CCCGCGAGCA CAGCCTGAGC GTGCTGGCGC AGCCGGGCGC GGTGATCTTC CCGCAGGTCA ATGCGCTGAT CGCCGAGCGC GGCTGGAAGG TCAAGGAACT CAACGTGGAA CGCGGCCGCC TGGATGAAGT GTTCCGCACG CTGACCCGGG GAGAGCAGCC ATGA
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Protein sequence | MIDIRNLTKR FAQHTAVDDL SFQVQPGEVL GFLGPNGAGK STTMKMLTGF LAPTSGTASI LGCDIQTQTL EAQRQIGYLP EGAPCYGDMT VRGFLDFIAE VRGFRGSEKK QRVQRAVEQV ELEKVLEQSI ETLSKGFKRR VGLAQAILHD PRVLILDEPT DGLDPNQKHQ VRQLIQGLAR DKIVIISTHI LEEVTALCTR AVVIAQGRLL ADGTPLELES RSRYHQAVTL VADEALDQAA LATLPGVAGV EENAREHSLS VLAQPGAVIF PQVNALIAER GWKVKELNVE RGRLDEVFRT LTRGEQP
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