Gene Pmen_3073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3073 
Symbol 
ID5107396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3399811 
End bp3400734 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content65% 
IMG OID640504330 
ProductABC transporter related 
Protein accessionYP_001188559 
Protein GI146308094 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATA TAAGAAACCT GACCAAGCGT TTTGCGCAGC ACACGGCAGT CGATGACCTG 
TCGTTCCAGG TCCAGCCAGG GGAAGTGCTG GGCTTTCTCG GCCCCAACGG GGCCGGCAAA
TCCACCACCA TGAAGATGCT CACCGGCTTT CTCGCGCCGA CCTCCGGCAC GGCGAGCATC
CTCGGTTGCG ATATCCAGAC CCAGACCCTC GAAGCCCAGC GGCAGATCGG TTATCTGCCG
GAAGGCGCGC CTTGCTATGG CGATATGACG GTGCGCGGCT TTCTCGACTT TATCGCCGAG
GTACGCGGTT TTCGCGGTAG CGAGAAGAAG CAGCGCGTGC AGCGCGCGGT GGAGCAGGTG
GAGCTGGAAA AGGTGCTGGA GCAGAGCATC GAGACGCTCT CCAAGGGCTT CAAGCGCCGC
GTCGGCCTGG CCCAGGCGAT CCTGCATGAT CCGCGCGTGC TGATCCTCGA TGAGCCCACC
GACGGTCTCG ACCCGAACCA GAAGCACCAG GTGCGCCAGC TCATTCAGGG CCTGGCGCGC
GACAAGATCG TGATCATTTC CACCCACATC CTCGAAGAGG TCACGGCGCT GTGCACCCGC
GCGGTGGTGA TCGCCCAGGG CCGCCTGCTG GCCGACGGCA CGCCGCTGGA GTTGGAAAGC
CGCTCGCGCT ATCACCAGGC GGTGACGCTG GTGGCCGATG AGGCGCTGGA CCAGGCTGCC
CTGGCGACGC TGCCGGGTGT CGCCGGTGTC GAGGAGAACG CCCGCGAGCA CAGCCTGAGC
GTGCTGGCGC AGCCGGGCGC GGTGATCTTC CCGCAGGTCA ATGCGCTGAT CGCCGAGCGC
GGCTGGAAGG TCAAGGAACT CAACGTGGAA CGCGGCCGCC TGGATGAAGT GTTCCGCACG
CTGACCCGGG GAGAGCAGCC ATGA
 
Protein sequence
MIDIRNLTKR FAQHTAVDDL SFQVQPGEVL GFLGPNGAGK STTMKMLTGF LAPTSGTASI 
LGCDIQTQTL EAQRQIGYLP EGAPCYGDMT VRGFLDFIAE VRGFRGSEKK QRVQRAVEQV
ELEKVLEQSI ETLSKGFKRR VGLAQAILHD PRVLILDEPT DGLDPNQKHQ VRQLIQGLAR
DKIVIISTHI LEEVTALCTR AVVIAQGRLL ADGTPLELES RSRYHQAVTL VADEALDQAA
LATLPGVAGV EENAREHSLS VLAQPGAVIF PQVNALIAER GWKVKELNVE RGRLDEVFRT
LTRGEQP