| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3063 |
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| Symbol | |
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| ID | 5107543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3389944 |
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| End bp | 3390738 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504320 |
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| Product | amino acid ABC transporter periplasmic protein |
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| Protein accession | YP_001188549 |
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| Protein GI | 146308084 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.898818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCTT CCCTCCTGCT GCCGGCCTTG CTGGCGGTCA TGCTGCCGAC GCAGGCCGAG
CCTAAGACAC TGCGCATCGG CACCGGCGAC TGGGCACCTT ATGTCGATCA GGGGCGCAGC
GACGGCGGCG CCCTGGCCCG CCTGATCAGC GCGGTATTCG CCGAGTCCGG CTACCGCGTC
GAGTACTTCT TCCATCCCTG GGATCGCAAT GTGCTGATGC TGCAGCAGGG CCAACTGCAC
GCCATCATGC CCTACAGCTG CAGCCCCAGT CGGCTCAACT ACGGTGTCTG CAGCGACCCG
CTGGTGCGCG GTGAGGTGGT GTTGTTCCAC CGTCGCGACA AGGCCTTCGA CTGGCAGCAT
GTCGAGGACC TGCTGCGCTA CCGCATCGGC ACCACGCTCG GCTATTCCTA CGGCCCCGCA
TTCGACGAGG CATTGCAGGC CGGAAGCCTG CAGGTGGAGC TCAGCGGCAA GGAGGAGACC
AGCTTCCGCC TGCTGGAACT CGGGCGCATC GACCTGCACC CGCAGGACCG CGCGGTGGGC
TATGCCATGC TGCGCCGTGT GTTCCCCGAT GGCGGCAGCC ATATCACCCA TCACCCGCGC
TTTTTGAACA AGGAACCGTT GCGCCTGCTG TTTCGCAAGG ACGACCCCGC AGCGGCCGAG
CTGCTGCATC AGTTCAATGC CGGCCTGCGC CGTTTCGCCG GGCGAGGCGA TCTGCAGAGC
CTGCAGCAGG CGCTCAACTC CGGCAACGCC GACGATTGGC TGCCCAGCGC GCCGAGCCAG
GCGGCGCGGG AGTGA
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| Protein sequence | MLASLLLPAL LAVMLPTQAE PKTLRIGTGD WAPYVDQGRS DGGALARLIS AVFAESGYRV
EYFFHPWDRN VLMLQQGQLH AIMPYSCSPS RLNYGVCSDP LVRGEVVLFH RRDKAFDWQH
VEDLLRYRIG TTLGYSYGPA FDEALQAGSL QVELSGKEET SFRLLELGRI DLHPQDRAVG
YAMLRRVFPD GGSHITHHPR FLNKEPLRLL FRKDDPAAAE LLHQFNAGLR RFAGRGDLQS
LQQALNSGNA DDWLPSAPSQ AARE
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