| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3006 |
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| Symbol | |
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| ID | 5107487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3327142 |
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| End bp | 3330093 |
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| Gene Length | 2952 bp |
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| Protein Length | 983 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504264 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001188493 |
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| Protein GI | 146308028 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000000182003 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAAAC CTGCCGCCCC TCGCGAGCGT CGATTCCCCC TGCATGTCCA TATCAGTGCC
CTGTTCACGC TGCTACTGCT GCTCACCGGC GTGGTGCTGG GTCTGTTCAA TTATCAGCAG
ACCAGTCAGA TCATCTTTTC CAGCAGCAGC AAACTCTTCG AACGCATCCA GCAGGATGTC
CAACAAGGGC TGGACAATAC CTACCGGCCG ATCCGCCACG TGCTCAGCCT GCTGGCCCTC
GACCCGGCCA CCCGGAGCGA TCATCTGGAT GGCCGCCTGG CGCTACTGCC CCCCTTCGTT
CAGGCGCTGC GCGACAACCC CAAGCTCGGC TCGCTGTTTC TCGGCTACGA GGACGGCGAC
TTCTTCATGG TCCGACCGCT GCGCAGCGAT GCCCTGAAAC AGCGCTTCGA TGCCCCGCCA
GGGGCGGCCT ATCAGGTCTG GTCAATCGAC CGTAGCGCCA CCGGCACCGA GTCCTACTAC
CTGTTCTACG ACGGCTCGCT GAACCAGATC AGCCGTCGTC AGCGCCTGAG CGAGAACTAC
GACCCGCGCA CACGGGACTG GTACAAGCGC GCCCGCGGCA ATGGCGGGCA GATCACCACG
GCGCCCTACG TGTTCTTTTC CACCGAGGAG GTCGGCACCA CCCTGGCCCG GCGCAGCGGG
CTGACCAATG TGCTGGCCGC CGACCTGACC CTGGACGACC TTTCCGCCAC GCTCGCCGCG
CACCGGGTGA CCGCCAACAG CGACCTGGTG CTGGCCGATG CCGAGGGCAA TGCCGTGGCC
TATCCCGACA GCAGCCGCCT GATACGCATC GAGGGCAGCA GCAAGACGCT GGTCAAGGTG
CGCGATATCA ATCCGGTGCT GGGCGAGCTG CTCGAGGGGC AACTGAACAA GCAGGATCAG
GGCATCGTCG AGCTGGCCAA GCAGCGCTGG GCCATGGCCC ACCGGCATAT CCAGGAAGGC
GGGCCGCAGG GGCTGCACCT GGCCCTGGTA GTGCCCGAGC ACGAGCTGCT CGCCGATGCC
TACCGCATTC GCTGGCAGGG TGCGCTGATC ACCCTGACCA CCCTGCTGCT TTGCGTACCC
CTGGGCTGGC TGGCCTCGCG CCTGGTGGTC AAGCCGTTGC GCGCGCTGGT GCAGGAAGCC
GAGGCGATCC GCCGCTTCGA CTTCGACTAT CCGGCCAGCG GCCGCTCGCC GGTGCTCGAG
GTGGACCAGT TGGCCGTCTC GATGACGCGC ATGAAGGACA CCCTGGGCCG CTTCCTCGAC
ATCGCCGCCA GCCTCTCGGC AGAAACCCGC TTCGACGCCC TGCTCCGGCG CGTGATGGAC
TCCACCGTGG CCATCAGCGA AGCACAAGGC GGCTTGATCT ACCTGCTCGA CGCCGACAGT
GGCCGCCTCG AGCCACAGGG CGTGGTGCTC GACGGCGAGG CGCAAGATCT GGAGGAGCTG
GGTATTCGAG GCTTCGCCCT GGACGAGCCA ACACTGCCGG ACTGGCTGCG CGGGCCGGCC
TCCGGCGGCG CCAGCAACGC CATGTCCATC GGCTTCGACC AGGCCGGCAG CTTTCGCGGC
CTGCTGGTGA AACTGGACAG CCCGCGTCTG CACCTGATCG CCGCGGGCCT GCACAATCGC
CAGGGCGACA CAGTCGGCGT GCTGGTATTG CTGCAACGAG ACGAAGGCGA CGGCAACGAC
AGCATGCTAC GCCCCGAGCG CCTGGCCTTC GTCGAGGCGG TGTCCGGCAG CGCCGCGCTG
TGCATCGAGA GTCAACGCCT GCTGGCAAGG CAGAAGCAGT TGCTCGACGC CTTCATCCAG
CTGATCGCCG GTGCCATCGA CGCCAAGAGT CCCTACACCG GCGGGCACTG CCAGCGTGTG
CCGGAGCTGA CGCTGATGCT GGCGCGCGCC GCTGCCGACA GCGACGCTCC GGAGTTTCGC
GATTTCCAGC CGGGCGACGA GGAATGGGAG GCGTTGCACA TCGCCGCCTG GCTGCACGAC
TGCGGCAAGG TCACCACCCC TGAATACGTG GTGGACAAGG CCACCAAGCT GGAAACCCTG
TACGACCGCA TCCACGAGGT GCGCATGCGT TTCGAAGTGC TCAAGCGCGA TGCCTGGATC
GCCTACTGGC AGGGCTGCGC CGCAGGGGGC GAAGAAGCGG CACTGGCCAG CCTGCGCGAC
CGGTTGCTGG CCGAACTGGA CGACGAGTTC GCCTTCGTCG CGCGCACCAA CCTCGGCGGC
GAAGCCATGG CCGAGGCGGA CCAGGCGCGC CTCAGGCAGA TCGCCGAGCG AACCTGGCTG
CGCACCCTGG ACGACCGCCT GGGCGTGTCC TGGGAGGAGG CCAAGCGCCA GGAGCGCTCA
CCGGCGCCAA CGCTGCCGGT GGCGGAGCCG CTGCTGGCGG ACAAGCCGGA ACACCTGATC
GAACGTCCCG CGCAGGAACT GATCGCCCCG GACAACCGCT GGGGCTTCAA GCTCGACGTG
CCGCAGCACA AGTTCAATCG CGGCGAACTG CACAACCTGA GCATCGCCCG CGGCACCCTG
ACGGCCGAGG AGCGTTACAT CATCAACCAC CATATCGTGC AGACCATCCT GATGCTCGAC
CGGCTGCCGT TCCCCAAACA CCTGCAGGGC GTGAGCGAAA TCGCCGGCGG CCACCACGAG
AAGATGGACG GCACCGGCTA TCCCAAGCGC CTCGTACGCG AGCAGATGAG CCTGCCGGCG
AGGATGATGG CGATCGCCGA TATCTTCGAG GCACTGACGG CGGTCGACCG TCCCTACAAG
AAGGGCAAGA CCCTGTCGGA AGCGCTGAAC ATCATGGTCG GCATGTGCAA AGGAGCGCAC
ATCGACCCCG AGCTGTTCGC CCTGTTCATC CGCAGCGGCA TACATCGGCG TTATGCCGAG
CGCTTCATGC TGGCCGAGCA GATCGACGAG GTGGACGAGC AGGCGCTACT GGAAAAGGCG
GGAGTTCTGT AG
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| Protein sequence | MRKPAAPRER RFPLHVHISA LFTLLLLLTG VVLGLFNYQQ TSQIIFSSSS KLFERIQQDV
QQGLDNTYRP IRHVLSLLAL DPATRSDHLD GRLALLPPFV QALRDNPKLG SLFLGYEDGD
FFMVRPLRSD ALKQRFDAPP GAAYQVWSID RSATGTESYY LFYDGSLNQI SRRQRLSENY
DPRTRDWYKR ARGNGGQITT APYVFFSTEE VGTTLARRSG LTNVLAADLT LDDLSATLAA
HRVTANSDLV LADAEGNAVA YPDSSRLIRI EGSSKTLVKV RDINPVLGEL LEGQLNKQDQ
GIVELAKQRW AMAHRHIQEG GPQGLHLALV VPEHELLADA YRIRWQGALI TLTTLLLCVP
LGWLASRLVV KPLRALVQEA EAIRRFDFDY PASGRSPVLE VDQLAVSMTR MKDTLGRFLD
IAASLSAETR FDALLRRVMD STVAISEAQG GLIYLLDADS GRLEPQGVVL DGEAQDLEEL
GIRGFALDEP TLPDWLRGPA SGGASNAMSI GFDQAGSFRG LLVKLDSPRL HLIAAGLHNR
QGDTVGVLVL LQRDEGDGND SMLRPERLAF VEAVSGSAAL CIESQRLLAR QKQLLDAFIQ
LIAGAIDAKS PYTGGHCQRV PELTLMLARA AADSDAPEFR DFQPGDEEWE ALHIAAWLHD
CGKVTTPEYV VDKATKLETL YDRIHEVRMR FEVLKRDAWI AYWQGCAAGG EEAALASLRD
RLLAELDDEF AFVARTNLGG EAMAEADQAR LRQIAERTWL RTLDDRLGVS WEEAKRQERS
PAPTLPVAEP LLADKPEHLI ERPAQELIAP DNRWGFKLDV PQHKFNRGEL HNLSIARGTL
TAEERYIINH HIVQTILMLD RLPFPKHLQG VSEIAGGHHE KMDGTGYPKR LVREQMSLPA
RMMAIADIFE ALTAVDRPYK KGKTLSEALN IMVGMCKGAH IDPELFALFI RSGIHRRYAE
RFMLAEQIDE VDEQALLEKA GVL
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