| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2973 |
|---|
| Symbol | |
|---|
| ID | 5107691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 3298233 |
|---|
| End bp | 3298784 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640504231 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001188460 |
|---|
| Protein GI | 146307995 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4430] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.1595 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCACG CACAAGAAAC CTCTCAATTC CAGGCAACCC TGCTACGTCC TCGCCTGGCG
GATGGCGAGG CGTTCTGGGC GTTCGTGGTA CTGCCCCGGG AGGCGAGCGA GAAACTGCCG
AGACGCGGCA GAACCAGCGT GGACGGCCGT ATCAACGGGC ATCCGTTCCA GGCCAGGCTC
GAGCCGGACG GCCAGCTGAG CCACTGGCTA CGGGTGGATA ACGACCTGCT GCAGGCGACA
GGCGCGGCCA TCGGCGATCT GGTGACGCTG GAGATCGCCC CGGTAGAGCA GGAGCCCGAG
CCGGACGTGC CGGCGGATCT GGCCGAGGCA TTGGCCGCCG CGCCCGAGGC GCGCGACGTC
TGGGACGCCA CGACGACCAT CGCGCGGCTG GACTGGATTC ACTGGATCGA GTCGGCCAGG
CAGTCCAAGA CCCGCGCCAA ACGTATCGCC GACGCCTGCG CCATGCTTGG CGAGGGGAAG
AAGCGGGTCT GCTGTTTCGA TCAGTCCGGC TATTACAGCA AGGCCTTCCG TGCGCCCGAG
GCCGTCGGGT GA
|
|---|
| Protein sequence | MPHAQETSQF QATLLRPRLA DGEAFWAFVV LPREASEKLP RRGRTSVDGR INGHPFQARL
EPDGQLSHWL RVDNDLLQAT GAAIGDLVTL EIAPVEQEPE PDVPADLAEA LAAAPEARDV
WDATTTIARL DWIHWIESAR QSKTRAKRIA DACAMLGEGK KRVCCFDQSG YYSKAFRAPE
AVG
|
|---|
| |