Gene Pmen_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2967 
Symbol 
ID5107685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3291961 
End bp3292338 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content65% 
IMG OID640504225 
Producthypothetical protein 
Protein accessionYP_001188454 
Protein GI146307989 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.03291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.134443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACC TGGCATTGCT GCTTCTAGGT CTCTGCATGG CGATCAGCGC CGCTGAGTCC 
GAGGATCCCT GTCAGCAGGG CAGCGCCATG GCTGCCAACC TCTGTCACGG GCCCGCGTGG
CAGGCGGCGG AAGACGAGCT ACAGCGCAGC TATGACCGTC TGCTGAGCCA TTTCAAGGAA
TACGAGCCGG AGCTGGTGGT GGAGCTGCGC GATGCCCAGC GGAGCTGGAT TCGCCAGCGT
GAGCAGAGCT GCAGCCTGTA TGCGCGCAGC CGCGTGCAGG GTTCACCCTG GACCGGTTTC
TGGGCTGCGC AGTGCATGGC CGAGCAGGCG CGAGCCCGCG CGGCCTGGTT GAAGACGATG
CTGGAAGATG AACTCTGA
 
Protein sequence
MRHLALLLLG LCMAISAAES EDPCQQGSAM AANLCHGPAW QAAEDELQRS YDRLLSHFKE 
YEPELVVELR DAQRSWIRQR EQSCSLYARS RVQGSPWTGF WAAQCMAEQA RARAAWLKTM
LEDEL