| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2908 |
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| Symbol | astD |
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| ID | 5107626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3218322 |
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| End bp | 3219785 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504163 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_001188395 |
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| Protein GI | 146307930 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.395764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.550645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTC ATTACATCGC AGGTCAGTGG CGGCCTGGCC AGGGCGCGCC TTTGCAATCG
CTCGATCCGG TCAGTCAGGC CGTGGTCTGG CAGGGGCAGG GCGCCAGCGC TGCCCAGGTC
GACGAGGCCG TCAACGCGGC GCGCGGGGCC TTTTCGCTGT GGGCAGCCCA TTCGCTGGAC
GGCCGTATCG CCGTGCTGGA GCGCTTCGCC GCCGCGCTGA AGAGTCATGC CGACGAGCTG
GCCCGCGCCA TCGGTGAGGA AACCGGCAAG CCGCTGTGGG AGGCCGCTAC CGAGGTGACC
AGCATGGTCA ACAAGGTCGC CATCTCGATC CAGAGCTACC GTGAACGTAC CGGCGAGAAG
AGCGGCCCGC TGGCCGATGC CACTGCCGTG TTGCGGCACA AGCCGCATGG CGTGGTGGCG
GTGTTCGGCC CCTACAACTT CCCCGGTCAC CTGCCCAACG GGCATATCGT GCCTGCCCTG
CTGGCCGGCA ACTGCGTGCT GTTCAAGCCC AGCGAGCTGA CCCCCAAGGT CGCCGAGCTG
ACGGTCAAAT GCTGGATCGA GGCCGGCCTG CCCGCTGGCG TGCTCAACCT GCTGCAGGGC
GGGCGCGAGA CCGGCGTGGC CCTGGCCGGC CATCCGGGTA TCGACGGGCT GTTCTTCACC
GGCTCCAGCC GCACCGGCAA TCTGCTGCAC GCCCAGTTCG CCGGGCGTCC GGACAAGATC
CTGGCGCTGG AGATGGGCGG CAACAACCCG CTGATCGTCG ATCAGGTCGC CGATATCGAT
GCGGCCGTGT ACACCATCGT CCAGTCTGCG TTCATCTCTG CCGGCCAGCG CTGCACCTGC
GCCCGCCGTC TGCTGGTGCC GCAAGGGCAG TGGGGCGATG CGCTGCTGGC GCGCCTGGTG
CAGGTCGCCG GACAGCTCAA GGTTGGCCGC TTCGACGAGC AGCCGGCGCC GTTCATGGGC
TCGGTGATTT CCCTGCAGGC CGCCGCACAG CTGATGCAGG CGCAGGCCGA TCTGCTGGCC
AAGGGCGCCA CTGCGCTGCT GGCCATGACC CAGCCGCAGG CCGATGCCGC GCTGCTGACA
CCGGGCATCC TCGACGTCAC GGCGGTGAGC GAACGTCCGG ACGAGGAGTT CTTCGGCCCG
CTGCTGCAGG TGATCCGCTA CAGCGATTTC GACGGCGCTA TCGCCGAGGC CAACACCACC
GCCTTCGGTC TGGCCGCTGG CCTGCTGTCG GACTCCAAGG CGCGCTACGA ACAGTTCTGG
CTGCATAGCC GTGCCGGCAT CGTCAACTGG AACAAGCAAC TGACCGGTGC CGCCAGCACC
GCGCCCTTCG GTGGCATTGG CGCCTCCGGC AACCACCGCG CCAGCGCCTA TTACGCGGCG
GACTACTGCG CCTACCCGGT GGCCTCGCTG GAAAGCGAAG CCCTGACCCT GCCCACCACC
CTGACTCCGG GAGTGACTCT GTAA
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| Protein sequence | MSTHYIAGQW RPGQGAPLQS LDPVSQAVVW QGQGASAAQV DEAVNAARGA FSLWAAHSLD
GRIAVLERFA AALKSHADEL ARAIGEETGK PLWEAATEVT SMVNKVAISI QSYRERTGEK
SGPLADATAV LRHKPHGVVA VFGPYNFPGH LPNGHIVPAL LAGNCVLFKP SELTPKVAEL
TVKCWIEAGL PAGVLNLLQG GRETGVALAG HPGIDGLFFT GSSRTGNLLH AQFAGRPDKI
LALEMGGNNP LIVDQVADID AAVYTIVQSA FISAGQRCTC ARRLLVPQGQ WGDALLARLV
QVAGQLKVGR FDEQPAPFMG SVISLQAAAQ LMQAQADLLA KGATALLAMT QPQADAALLT
PGILDVTAVS ERPDEEFFGP LLQVIRYSDF DGAIAEANTT AFGLAAGLLS DSKARYEQFW
LHSRAGIVNW NKQLTGAAST APFGGIGASG NHRASAYYAA DYCAYPVASL ESEALTLPTT
LTPGVTL
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