Gene Pmen_2898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2898 
Symbol 
ID5107813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3206677 
End bp3207138 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content62% 
IMG OID640504149 
Productketosteroid isomerase-like protein 
Protein accessionYP_001188385 
Protein GI146307920 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC AAAAAGCTGT CGCCGCCCTA CTGCTCAGCC TGTCGCTCTG CCTGCCGGCC 
TGGGCAAGTG ACAACACCGC GGCCAATCAG GCCCTGATCC AGAAAGCTTT CGATGATTGG
CGCACAGGCC AAGGCGGCAT CTTTCAGTTG CTAGCCGATG ATGCCGTCTG GGTCGTGGCC
GGTAGCAGCC CATACTCCGG GACTTACCGC ACGCGCGAGG CGTTCATGGA AGATGCAGTC
AAACCCATCA CCGACAAACT GGCCACGCCC ATCGTGCCCA CCGTCCGCCA GATCGTGGCG
CAGGGGCCTC ACGTGGTGGT GCACTGGGAT GGCCAGGCGA CCGCCAAGGA CGGCAGTCGC
TACGAGAACA GCTATTCCTG GCACATGCAG CTGGAGAATG GCCGGATCAC CCGGGTCACG
GCCTTTCTCG ATACCTGGCG GCTGGTGCAG TTGATGGAGT GA
 
Protein sequence
MNMQKAVAAL LLSLSLCLPA WASDNTAANQ ALIQKAFDDW RTGQGGIFQL LADDAVWVVA 
GSSPYSGTYR TREAFMEDAV KPITDKLATP IVPTVRQIVA QGPHVVVHWD GQATAKDGSR
YENSYSWHMQ LENGRITRVT AFLDTWRLVQ LME