| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2887 |
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| Symbol | |
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| ID | 5107802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3196807 |
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| End bp | 3197529 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504138 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001188374 |
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| Protein GI | 146307909 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0481832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGCCCTT TTCAAACGAT GAACTTGTCT AGACAAAGCG AACCGCTGTA CCGCGAGCTG
GCCGCCGTGC TGCGCGAAGA CGTGCAGCGC ATGAACCCAG GCGATTACCT GCCGGGCGAG
ATGCAACTGG CCGCACGTTT TTCCGTCAAC CGTCACACCC TGCGCCGCGC GGTGGACGAG
CTGGTGCTCG AAGGCCGCCT GCTGCGCCGC CAAGGCAAGG GCACCCAGGT GCTGGCCAGA
CCACTGGTGT ACCCGGTGGA GGCGGGCAGT GCCTTCAGCC AGTCGCTGTC GGCGCTCGGC
CACCGTGTCG AGGCCAGGCT GATCGAGCGC CTGCGCCGCA CTGGCAGCAC TGAGGAATGC
CGCCACCTGC AACTGCCTGA CGGCAGTGAG CTGATCGAGC TGACCACCCT GCGCCTGCTC
GAGGGCCAGC CGCTGAGCCT GATCCGCCAC CGCTTCTGCG CCAGCCTGGC GCCACTGTTG
GCCGACTACC AGGGCGGTTC GCTGCGCCAG TACCTGGCCG AGCGCGATCT GCCGCTGGCG
CGCACTTTCA GCCTGATTGG TGCGCGTCTG CCCAGCCGCG AAGAAGCCGC GCACCTGCTG
ATGCCGCGCC ATGCGCCGCT GCTCAGCGTA CTCACATTGT CCCGCGATCC CGCTGGCCGG
GCGGTGGAGC TGGCGCAGTC CAGCAGCCGC GCCGACCGCT TCCAGTACCA GGTAGCGACC
TGA
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| Protein sequence | MRPFQTMNLS RQSEPLYREL AAVLREDVQR MNPGDYLPGE MQLAARFSVN RHTLRRAVDE
LVLEGRLLRR QGKGTQVLAR PLVYPVEAGS AFSQSLSALG HRVEARLIER LRRTGSTEEC
RHLQLPDGSE LIELTTLRLL EGQPLSLIRH RFCASLAPLL ADYQGGSLRQ YLAERDLPLA
RTFSLIGARL PSREEAAHLL MPRHAPLLSV LTLSRDPAGR AVELAQSSSR ADRFQYQVAT
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