| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2866 |
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| Symbol | |
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| ID | 5107781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3146713 |
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| End bp | 3148749 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504116 |
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| Product | iron-hydroxamate transporter permease subunit |
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| Protein accession | YP_001188353 |
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| Protein GI | 146307888 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0652395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00619178 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGAGTT TGAGTCGCCC CGGGCAGTCT GCCGCTGCCC GTGGTTTCGG TCATGCTGGC
CTGGCGCTGC TGGGGCTCGC GCTGCTGCTG GCCATGCTGC TGTGGCAGGG CGTGTTGCGC
CATCCCTGGC CAACGGCCGA GGCCTGGTTG GCGCCGCTGT CGTCGACGCC ATCGCTTGAC
GGCCTGCTGC TGTGGTGGAC CCAGCTGCCA CGCGCCTTTG CCGGAGTGCT GGTGGGCGCC
TGCCTGGGCG TTTCCGGAGC GATCATGCAG CTGATCACGC GCAACCCGCT GGTGTCGCCG
GATCTGCTCG GCATCACCGC CGGGGCGCAA CTGGGTGTGA TCCTCGGCAT GCTTCTGCCT
GGCGTCCTGG GATTGCCGCT GATCTTCGTC GGCGGGCTGC TGGCGGCCTT GTTCACCTTT
CTGATGGCAG GCGGCTGGAA CACCTCGCCG CTGCGCCTGA CCCTGGCCGG GGTGGCGGTG
GCGCAGACCT TTGCCGCGCT GATCGCGCTG TTTCTCAGCC TCAACGACCA GGCTGCGATG
GTGGTGTCGC TGTGGAATAC CGGTTCGCTG CAGCAGTTGG GCTGGGGCGC GATGCATCCG
GCCCTTTACC TGTTGCCGCT GATTGCCCTG GCGCTGCTGG TGCTGATGCG GCCGATGAAC
CTGGCCGTGT TGGGCGACGG GCAGATGCGC TCGCTGGGGC TTTCGCCGGC CTGGCTGAAA
GGGCTGAGCA TCGCTCTGGG TAGCCTGCTG GCGGCGCTGG CTATTCATCT GGCTGGTCCC
TTGGGCTTTA TCGGGCTGAT CACGCCGAAT CTGCTGCGCT TTGCCTTCGC CGTGGTGCGA
CCGTCTCGGT TGATCCCCTT GTGCGCGATC TGGGGCGCAT TGCTGACGGT ACTCGCCGAC
GCGCTGGTGG CAGCGGTGGA GCCCTGGTTC CAGTTGCCGC TGGGGGTGCT GTCGGCGGTT
CTCGGTTCGC TGGCGATCCT CTTGCTGCTG CGTTACGGGC GGCGCGCGCC GGTGGCGGCG
GTCACGGCGA GCATGCCGGG CGAGAACCGC GCCATGCGCC TGCCGCTGTG GTCGTTCGTC
GCGCTCGCGG TGCTGATCTG CCTGGCTCTG CTGGTAGCGG GCACGGCGCA GGGCGAATCG
GGCATCTGGT CGTTCTGGCA GCGGGTGTGG AGCGGCGAGC CCATGGCCAT GACGCTGCTC
GATCTGCGCC TGCCGCGGCT GCTGGTGGAC ATGGCCGCCG GGGCGCTGCT GGCGACCGCG
GGCATGCTGT TGCAGGCGGT CACGCGCAAC CCGCTGGCCG GTCCGGAAAT TCTCGGGGTA
AGCCAGATGG CAGCCCTGGT GGTGCTGCTG GCCCTGATCT TCATGCCCGA GCTGGCTGTT
GCCTGGCGCT TCCCGCTGGC CTGGCTGGGT GCCGGCCTGG CGCTGGTGAT CGTCATCGGC
CTTAACCTGC GTCACGGCCT GGAGCCGCTG CGCGTGACGC TCACCGGCTT TGCCATCAGC
GGCGTGGTGC TGGCCGTGGT GAGCCTGCTG ATGGCGCAGT TCACCAGCAA TATCGCCCAG
GCGCTGATCT GGATGGTGGG CAGCAGCTAC GGGCGTACCT GGAGCGATCT GCAGGCCATG
CTGCCCTGGC TGGTGATCGG CCTGGCGCTG TGCGCGGCGA CCACGCGCTG GATGGATCTG
CTGCAGCTGG GCGACGGCGT GGCCGGCAGC CTCGGGCTGT CGGTGCCGAG CCGGCGGGTG
TTGCTGATCG TGCTCGCCAG CGCACTGATC GCAGCGGCCG TGGCGGTGGT CGGCCCGGTG
GCATTCATCG GCTTGCTGGT GCCGCATGGC GTGCGTCTGC TGGGCTTTCA TCGTGCCCGT
CAACGTCTGC TGGCGGCGCC GCTGCTGGGC GCGACCCTGT TGGCCTCGGC TGACTTGCTC
GGACGCGTGC TGCTGGCGCC GCTGGATATC CCGCTGGGAA TCGCCACGGC CGCCATCGGT
GCGCCGTTGT TCCTGCTGCT GCTCAGCCGC GTCTATTTCA GTGACAAAAG GAGCTAG
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| Protein sequence | MTSLSRPGQS AAARGFGHAG LALLGLALLL AMLLWQGVLR HPWPTAEAWL APLSSTPSLD
GLLLWWTQLP RAFAGVLVGA CLGVSGAIMQ LITRNPLVSP DLLGITAGAQ LGVILGMLLP
GVLGLPLIFV GGLLAALFTF LMAGGWNTSP LRLTLAGVAV AQTFAALIAL FLSLNDQAAM
VVSLWNTGSL QQLGWGAMHP ALYLLPLIAL ALLVLMRPMN LAVLGDGQMR SLGLSPAWLK
GLSIALGSLL AALAIHLAGP LGFIGLITPN LLRFAFAVVR PSRLIPLCAI WGALLTVLAD
ALVAAVEPWF QLPLGVLSAV LGSLAILLLL RYGRRAPVAA VTASMPGENR AMRLPLWSFV
ALAVLICLAL LVAGTAQGES GIWSFWQRVW SGEPMAMTLL DLRLPRLLVD MAAGALLATA
GMLLQAVTRN PLAGPEILGV SQMAALVVLL ALIFMPELAV AWRFPLAWLG AGLALVIVIG
LNLRHGLEPL RVTLTGFAIS GVVLAVVSLL MAQFTSNIAQ ALIWMVGSSY GRTWSDLQAM
LPWLVIGLAL CAATTRWMDL LQLGDGVAGS LGLSVPSRRV LLIVLASALI AAAVAVVGPV
AFIGLLVPHG VRLLGFHRAR QRLLAAPLLG ATLLASADLL GRVLLAPLDI PLGIATAAIG
APLFLLLLSR VYFSDKRS
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