Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2836 |
Symbol | |
ID | 5107751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3113531 |
End bp | 3118810 |
Gene Length | 5280 bp |
Protein Length | 1759 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640504086 |
Product | glycosyl transferase family protein |
Protein accession | YP_001188323 |
Protein GI | 146307858 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0244809 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGC AGGATCAGGG AGATGTCGCT CGACAGTTCT GGCGCTCCAG CAAACGAGGG CAGATTGGGC CGGAGCAACT CTACGAGCGG CAACGCGAGC ACCTGCAGCA GGATATTATT CCCTTGCTGG AGGGCGATGC ACGGCTGTTG GATATCGGTT GCGCTGATGG CGAGTTCAGC CTTCTGTTTG CACAGAAGGT TGCACACGTG CTGGCATTCG ACATCGGCGA GGAACTTGTT GCTCAGGCGC GCGAACGCGC AGAGCACCTG GGTATTGGCA ATATCGAGTT TCGAGTCGCC GACATTTTCG AGTTTCAAAC TGACGAGCGT TTTGACGCCG TCAGTCTGAT GGGGGTTCTT ACCTGTATCA GCGACGATAA CGCTGCTGCC CGCGTGTTGC TGAAGGCGAC CTCCCTGCTG AAGCCTGGTG GTCTGCTGAT ACTGAAGGAT TCCGTGCTCT TGCATGGGCA GGAGCCGCGT TATCTGCTCA CCGAGCACTA TGAGGCCAAG TATCGCCCTG AAGCTCGCTA TCTGGCGTTA ATCCGCTCCA TGGGCCTGCA TGAGGTTGCA AATTACCCAT TGCTGACCAT GGACAACTGC GAGCAGACCA GCGTTCTGTA CCTGTTTCGC CCTGTCTTGG CTCAGCAGCC GTCATTACCG ATCCGTGGAT TGCGAGTTGC CTGCTACGGC AGCATGCCAT TTCATTTTCG CTCCCTGCGG CCTCTGGCCG AGTGTTTCGA AGACAGTCTG CTGAGCTTGT CCATCGAGGA GGTCATGGCC TGGCGGCCCC AGGTCATCGC AGTGGCGGAT GGCTGGTCGG TGGAATTCTG GCGTGATTAC TGCGATGCCC ATCAGGTTCT GTTGATCGGT ATGCGCCATG GCTCGGTGAC TCGATATGGA TTTGCCGAGC CTCAGTACAA TCATGCCGAC TACCTGTGCG GTAGTGTCTG GGATATCGAA GATACCCTGC TGTCGGACGT GCATCCGCGC CTTGGTTTTC TGCTAACGGG AAACTCATGG GTCGACCAGG TCTTCAGATT GCCGCCCAGA GCCGATTTTG ACGCCCAACC GACCATCCTT TTTGCCCCCA CCTACAATCC CGAGATCAGT GCTGCGGTCT ATTTCGGCGA GCGTGTCGTT TCGCTGATCC GCAGTATCTA TCCGCAAGCC CGGATCATCA TCAAACCGCA TCCAGCGATT GTTCAGCACG AGCATGGTTT CGTGGTGGAC AAGGGACTGT TCCGTGAGTT GATGGCCGTC TGGCGCGCGC AGGTCGCTGA AGATCCTTTG TTGCAGTTGG TCGATGACCC TGAGGCGAGC ATTGCCGATA GCTTTGCCGA GGCCGACATT CTGGTGGCGG ACCGTTCCTC GCTGCTGTTC GAGTACATGG TTCTGGACCG ACCCATTTTG CTGTATTCGA GCGATGCCCG GGTCGAGCAT TGGGATTACA ACCCGCAAGC TCCTGGCAAT GCATGGCGCG ATATCGGTAT GGAGTTCAGT GATGACTCCA GCTTCCTGGC GCTGTTGAGG GATGCCAGAC GAAATCATCA GGAGTTTTGT CGTGAGCCGC AGGCTCGGCG TACCCGTCAG CTCTACGGCG ACTTCCGTGA TGGCCGCTCG GTGCAGCGCG TGGCAGCCGC CATTGCTCAG GTGCCCAGGC CTCATGTTCT GATTAATTCG TGGGATAGCA AGCGAAGTGC AGCGTTGCTC GAGGCGTTCG ATGATCGCCT CGCTTTCAAG CGTATCTCGC TCATCGGCTC CCAGGTGAGT TCGGAGCAAT TACACGATGT ACGCCAGTAC GAGGATTTCT CCCAGTGGCG GCGGGCGCAG TCTGATCGGG AGCTTGATCA GGCGGTATTG CTTGTCGATG GCCGTAGTTC GTACCAGCCT GGCAGCGCAA ACCAGATATG TCACGGCCTG GCGTTGCTGG CGCGAGGAGA TGCGGATGCG CAATTGCTGA GCCAGCGGTC CCATGATGAG CCGGCTCTGA CTGGCGCTAC GGCTGAGGAA TGGATTCGAG AGCGTCAGAA CTGGGCATTG GATGCTCTGC TGGGTGAGCC TGTCTGGCAA CTGCTGCCTG CCCATCGTTT ACGAAGGGCG TTGCGAGTCT TGCCGGTTTC TCTGAGCGAT GGTGTCGTGG CCACTTGGTG GAAAACGCTA TGCGCGCAAG GGCAAACCGT GCATTGGCGA TCCGAGCGGC TCGATGTGGT CATGGATGCT TCTGTCGTGC GTGTGGTTGG GCGCGGTCAT TATCTGGCTG GCCCCAAGGC CAGATTACAG CTTGTACCGG CTGTGCAGGG CTGGCCACGG CATCAGGCGG CCGTGCATCT GCAAATCTGC GCTGTAGAGG GCGCTGACTA TGATCGTTTC CCTTTCAAGG CCGATATTCG CCTCAATGGC GTGCGCTGGC GCGAGATAAG CTTCTCCAGT TTCCGGCCGC AGTGGATTGC TCTGCCGTTT CATCCCAACG AGGCAGGGGT AGTAGAAGTC GAACTGCATA GCAGTGCCAT GTTCCCGGGG ATGACCGGAT TGGCTGGCCC GCTGTCCGTG GCGCTGGCTT TTGCCGACGA GGCGCCTGAA GAAGCAAGTT CCGATAGCGA CAGCTCGACG CAATTGCTGG AGCAATGGCT AGCCGCTAGG CAGTTGACTC CAGTGCAGCA GCGATTGGTC GTCGAGCGTC TTGGGCAATA TGCTGGTGGA CCTGCCTTCG GCGTCGTGAT TCTCGATCCG GAAGGTGACG CAAGCCTTGT TGCGACTACG CTGCGAAGCC TGTTCCGGGA AGATTCCCTG TATCAGGTGC AGAAGGTCGT GGTGCTCTCG AGCGCAGACA CGGCAACCAC CGCTGCGGAT GCACGTCTGC ATTTTCTGCA GATCGAATCG GATCACTATG CCGAGGCGAT CAATACCTTG GTCGAGCAGG GTGGTTATGA CTGGTTCATG CTTGCCCGTG CCGGTGATCA GTTCACCCAG CATGGATTGT TGATGGCGGC TTTGGCTCTG CTTGAGGCGC CTGGCTGTCG TGCCATTTAT GGTGATGCCT TGCAGCGAAT GGGGGATTCC AGTCTGGGGG CGGTTCTGCG CCCAGACTTC AATCTCGATA TGTTGCTGAG CTTCCCTGCC GCCATGGCGC GGCACTGGCT ATACAGGCGC GAGGACTTCC TGGCCATCGG CGGTTTCGAT CCGGTTTATG GCGGTGCGTT GGAGTTCGAC TTGCTTTTGC GTTTGATCGA GCATGGCGGC ATGGTGGGGC TTGGCCATAT CGATGAGCCC TTGGTCGTGG CCGAGGCGCC TAGGCTGCAG GACAACGAGT GTGAACGCGC CACCCTGTTG CGCCACTTGG CCTTGCGCGG TTACCAGGCT TCGCTGAAAC CTCATATGCC GGGGCGCTAC CGCATTGACT ACGGTCACTC GGTGCAGCCG TTGGTGTCGA TCATCATACC CACCAAGGAC CAATTGCCGA TTCTGCAGCG TTGTGTGGAA AGCCTGCTGG AGAAAACGCG TTATCCGAAC TATGAGGTTC TGATAGTCGA CAACGATAGC CAGACGCCCG AAGCGCAGGC CTGGCTGGCT GGCGTGGAAA GCTGGGGAGA GTCGTTGGTG CGGGTCTTAC GCTACCCGTA TCCGTTCAAC TATTCGGCCA TCAACAATAT GGCCGCCCAG GCCGCGCGCG GCGAGTACTT GGTGCTGCTC AACAACGATA CGGCCATCCT GCGTGAGGAT TGGCTGGGTG CCATGCTCAA TCATGCGCAG CGTCCGGAAG TGGGTGTGGT CGGTGCCAAG CTGCTCTATC CGGATGGCCG CATCCAGCAC GCCGGGGTTG TTCTCGGCTT GCGCGGACCT GCAGATCATC CTTTCATTGG CGAGGCCATG GATGCGCCGG GGTATATGCA GCGCCTGCAG GTGGATCAGA ACTACAGCGC AGTGACTGCG GCCTGCCTGA TGATCCGCAA GTCTCTCTAT GAAGAAGTGG GTGGGCTCGA TGAGGAAGCC TTCAAGGTTT CCTATAACGA TGTCGATCTT TGCCTGAAGA CGCGTGAGGC TGGCTACCTC ACGGTATGGA CGCCGCATGC CGTCGTAATG CACGAGGGCA GCGTCAGTCA GACCAAGGTC GATCCGGCGG CTCAGGAGGC CAAGCGCAAG CGCTTCGTTG CCGAACAAGA TGCCATGTAT GCCAAATGGT TGCCGCTGAT CGCCGCCGAT CCCGCATACA ACCGCAGCCT TTCGTTGAGC GGAGCCGGGT TTGCTCTGGA AGCCGATTCG CAACTGACCT GGCGTCCGCT GGATAGTTGG CGTCCACTAC CCGTTGTGCT TGCTCACCCG GCTGACCCCT GGGGGTGCGG TAACTACAGG GTCATCAAGC CATTCGAGGC GATGCGCGAT GCGGGGCTTA TCGATGGCAT GCTTTCTGAT GGGCTCTTGC AGGTGGCTGA TCTTGCGCGT TACGACCCTG ATGTACTGGT GCTTCAGCGC CAACTGAGCG ACGAGCGCCT GGAGGCCATG CGCAGGATCA AGACGTTGTC ACGAGCGTTC AAGGTCTACG AGCTGGATGA TTACCTACCG AACCTGCCGA TGAAGAGCCT GCACCGCGAA CACATGCCCA GGGATGTGCT GAAATCGTTG CGTAAAGGCT TGGGGTTCGT TGATCGCTTC GTGGTGTCTA CCGAGGCATT GGCTGATGCC TTCTCGGGCT TGCACGCCGA TATCCGGGTG ATCGAAAACC GATTGCCTCG CGAGTGGTGG CAGAACCTGA CCAGTCAGCG ACGACGTGGG CGCAAGCCTC GCGTCGGTTG GGCAGGGGGT GTCAGTCACA CCGGGGATCT GGAACTGATC GCCGATGTGG TCAAGGAGTT GGCTGGTGAG GTTGAGTGGG TATTCATGGG GATGTGTCCG GATCGCATCC GCCCCTACGT GCAGGAAGTG CATGCTGGTG TAGATATCAA CGCCTACCCG GCGGCCTTGG CAAGCCTGGA TCTGGACCTG GCTCTGGCGC CTGTGGAGCA AAACCTGTTC AACGAGTGCA AGAGCAAGTT GCGCCTTCTG GAATATGGCG CCTGTGGTTT CCCCGTGGTG TGCAGCGATC TGCGTTGCTA CGAAGGTGAG CTACCCGTGA CGCGGGTGAA AAACCGCTTC AAGGACTGGG TCGATGCCAT CCGTGTGCAT GTCAATGATC TTGATGCGTC CGCTCACCAG GGCGATGCGT TGAGGGCTGC AGTCATGCGC GACTGGATGC TTGAGGGAGG GAATCTCGAG CTCTGGCGCC GCGCCTGGTT ACCGGATTGA
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Protein sequence | MSKQDQGDVA RQFWRSSKRG QIGPEQLYER QREHLQQDII PLLEGDARLL DIGCADGEFS LLFAQKVAHV LAFDIGEELV AQARERAEHL GIGNIEFRVA DIFEFQTDER FDAVSLMGVL TCISDDNAAA RVLLKATSLL KPGGLLILKD SVLLHGQEPR YLLTEHYEAK YRPEARYLAL IRSMGLHEVA NYPLLTMDNC EQTSVLYLFR PVLAQQPSLP IRGLRVACYG SMPFHFRSLR PLAECFEDSL LSLSIEEVMA WRPQVIAVAD GWSVEFWRDY CDAHQVLLIG MRHGSVTRYG FAEPQYNHAD YLCGSVWDIE DTLLSDVHPR LGFLLTGNSW VDQVFRLPPR ADFDAQPTIL FAPTYNPEIS AAVYFGERVV SLIRSIYPQA RIIIKPHPAI VQHEHGFVVD KGLFRELMAV WRAQVAEDPL LQLVDDPEAS IADSFAEADI LVADRSSLLF EYMVLDRPIL LYSSDARVEH WDYNPQAPGN AWRDIGMEFS DDSSFLALLR DARRNHQEFC REPQARRTRQ LYGDFRDGRS VQRVAAAIAQ VPRPHVLINS WDSKRSAALL EAFDDRLAFK RISLIGSQVS SEQLHDVRQY EDFSQWRRAQ SDRELDQAVL LVDGRSSYQP GSANQICHGL ALLARGDADA QLLSQRSHDE PALTGATAEE WIRERQNWAL DALLGEPVWQ LLPAHRLRRA LRVLPVSLSD GVVATWWKTL CAQGQTVHWR SERLDVVMDA SVVRVVGRGH YLAGPKARLQ LVPAVQGWPR HQAAVHLQIC AVEGADYDRF PFKADIRLNG VRWREISFSS FRPQWIALPF HPNEAGVVEV ELHSSAMFPG MTGLAGPLSV ALAFADEAPE EASSDSDSST QLLEQWLAAR QLTPVQQRLV VERLGQYAGG PAFGVVILDP EGDASLVATT LRSLFREDSL YQVQKVVVLS SADTATTAAD ARLHFLQIES DHYAEAINTL VEQGGYDWFM LARAGDQFTQ HGLLMAALAL LEAPGCRAIY GDALQRMGDS SLGAVLRPDF NLDMLLSFPA AMARHWLYRR EDFLAIGGFD PVYGGALEFD LLLRLIEHGG MVGLGHIDEP LVVAEAPRLQ DNECERATLL RHLALRGYQA SLKPHMPGRY RIDYGHSVQP LVSIIIPTKD QLPILQRCVE SLLEKTRYPN YEVLIVDNDS QTPEAQAWLA GVESWGESLV RVLRYPYPFN YSAINNMAAQ AARGEYLVLL NNDTAILRED WLGAMLNHAQ RPEVGVVGAK LLYPDGRIQH AGVVLGLRGP ADHPFIGEAM DAPGYMQRLQ VDQNYSAVTA ACLMIRKSLY EEVGGLDEEA FKVSYNDVDL CLKTREAGYL TVWTPHAVVM HEGSVSQTKV DPAAQEAKRK RFVAEQDAMY AKWLPLIAAD PAYNRSLSLS GAGFALEADS QLTWRPLDSW RPLPVVLAHP ADPWGCGNYR VIKPFEAMRD AGLIDGMLSD GLLQVADLAR YDPDVLVLQR QLSDERLEAM RRIKTLSRAF KVYELDDYLP NLPMKSLHRE HMPRDVLKSL RKGLGFVDRF VVSTEALADA FSGLHADIRV IENRLPREWW QNLTSQRRRG RKPRVGWAGG VSHTGDLELI ADVVKELAGE VEWVFMGMCP DRIRPYVQEV HAGVDINAYP AALASLDLDL ALAPVEQNLF NECKSKLRLL EYGACGFPVV CSDLRCYEGE LPVTRVKNRF KDWVDAIRVH VNDLDASAHQ GDALRAAVMR DWMLEGGNLE LWRRAWLPD
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