| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2788 |
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| Symbol | |
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| ID | 5107584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3069267 |
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| End bp | 3069443 |
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| Gene Length | 177 bp |
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| Protein Length | 58 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640504038 |
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| Product | Heme exporter protein D (CcmD) |
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| Protein accession | YP_001188275 |
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| Protein GI | 146307810 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.90473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTTT CGTCCTTTGC CGATTTTCTC GCCATGGGCA CCCATGGCGT ATACGTGTGG
AGCGCCTACG GCATCAGCCT GGCGATTCTG GCGTTGAATG TGGTGCTGCC GATCCTGGCG
CGCCGCCGTT ACCTGCAAGA CGAGGCGCGC CGTTTGCGCC GGGAGAAGTC GAAGTGA
|
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| Protein sequence | MSFSSFADFL AMGTHGVYVW SAYGISLAIL ALNVVLPILA RRRYLQDEAR RLRREKSK
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