Gene Pmen_2743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2743 
Symbol 
ID5107894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3012392 
End bp3012949 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content64% 
IMG OID640503993 
ProductSmr protein/MutS2 
Protein accessionYP_001188230 
Protein GI146307765 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0170121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.729725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACG ACGACATTTC CCTGTTCAAG GCCGAGCTGC GCGGCGTCAA GCCGATCAAG 
CACGACCGTG CCGACACCGG CAAACCCAAA CCCGACCGCA AGCAGTTCAC GACCTTGCGC
CAGGCGGCAA CCATCAGCCA GGGCGAGACC AAGGTGGACG GCCTGTCCGA CCAGTTCGTC
ATCGACGTCG GCGCCGAGGA CCCGCTCTAC TGGGCCGGCA ATGGCGTGCA GGAAGGGCAG
ATGCGCAAGC TCAAGCTCGG CCAGATTCCC TTCGACGGCA GCCTCGACCT GCACGGCATG
AGTGTCGAGA AAGCGCGTGA CACGCTGTGG GAGTTCCTCG CCGAAGCCGC CAGGCTAGAG
GTGCGCTGCG TGCGCGTGAC CCATGGCAAG GCGGTGCGCA TGGACGGGCG CAAGCCTATG
ATCAAGAGTC ATGTGAACAC CTGGCTGCGC CAGCACCCGC AAGTGCTGGG CTTCACCTCT
TGTCAGGCCA AGCACGGTGG CACCGGCGCC GTGTATATCC TGCTCAAGCG CACCATGATG
GATGGCCGCG ACGAGTAA
 
Protein sequence
MQDDDISLFK AELRGVKPIK HDRADTGKPK PDRKQFTTLR QAATISQGET KVDGLSDQFV 
IDVGAEDPLY WAGNGVQEGQ MRKLKLGQIP FDGSLDLHGM SVEKARDTLW EFLAEAARLE
VRCVRVTHGK AVRMDGRKPM IKSHVNTWLR QHPQVLGFTS CQAKHGGTGA VYILLKRTMM
DGRDE