| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2729 |
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| Symbol | |
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| ID | 5107880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2994763 |
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| End bp | 2995212 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640503973 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001188216 |
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| Protein GI | 146307751 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.595703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.232765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTGGG ATCTTCCCAG CCCCTTCGTC ATCGACATCC AGGTGTCCGC CGAGGACATC
GACGGTCTCG GCCATGCCAA CAATGCGGTA TACGTCAGTT GGCTGGAGCG CTGCGCCTGG
CGTCATTCGC AGTTTCTCGG GCTGGATCTG GTGGAATACC GCCGCCTGGA TCGCGCCATG
GCCGTGGTCC GGCATGAGAT CGATTACCTG GCCAGCGCCT ACGAAGGGCA GCATCTGCAA
ATGGCGACCT GGATCGTCGA ATCCGACCAG CGGCTGAAGA TGGACCGGCG CTTTCAGCTG
CTGCGTCCCG AGGATGCGGT GACGCTGTTG CGGGCCAAGA CCACCTTCGT CTGTATCGAG
CTCTCCAGTG GCCGGCCAAA GCGCATGCCC GCGGAGTTCG TCGACGGCTA CGGCAAGGCG
CTGCTGCAAC CCTATCCGCT GGAGCTGTAG
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| Protein sequence | MNWDLPSPFV IDIQVSAEDI DGLGHANNAV YVSWLERCAW RHSQFLGLDL VEYRRLDRAM
AVVRHEIDYL ASAYEGQHLQ MATWIVESDQ RLKMDRRFQL LRPEDAVTLL RAKTTFVCIE
LSSGRPKRMP AEFVDGYGKA LLQPYPLEL
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